Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00147 ATGAAAATCCAATGCGATGTTTGTGAGAGAGCTCCGGCTACTGTGATTTGTTGTGCTGATGAGGCGGCTCTGTGTGCGAAATGCGATATTGAAGTTCATGAAGCAAACAAGCTTGCAAGTAAACACCAGAGACTTCTTCTTGAATGTCTCTCCAACAAGCTCCCCCGCTGCGACATCTGCCAAGAGAAGACAGCTTTCATTTTCTGTGTTGAAGATAGAGCTCTCTTCTGTCGGGATTGCGACGAGCCAATTCACTCTGCCGGTAGCCTTTCCGGCAACCACCAACGACTTCTAGCCACTGGCATCAGAGTGGCTTTGAGCTCTAATTGTGCTAAAGACGCTGTGAAAGGCTGTTCTTCAGACCCACCAAACCAGAACTCACAAACACTCACCATGAAAAGGCCTGCACCCCAACCCCCTACCTGCACATCTCCGTCGTGGGCCGTTGATGATTTGCTTCAGTTTTCCGATTTCGATTCCAGTGACAAGAAAGAAAATATTGAGTTTGGAGAGCTCGAATGGTTTAATGACATTGGTCTCTTTGGTGAACAAGTTCCTCAACATGCCTTAGCAGCAGCAGAAGTTCCTCAACTCCCCATTTCACAACCAAGTAATGCCAATTCATACAGACCCACCAAATCCAACATGCCCTTCAAGAAGCCTAGGAATGAGATTGCAGATGATGAGGAGGAATACTTCACTGTCCCTGATCTTGGTTAA 720 0.4694 MKIQCDVCERAPATVICCADEAALCAKCDIEVHEANKLASKHQRLLLECLSNKLPRCDICQEKTAFIFCVEDRALFCRDCDEPIHSAGSLSGNHQRLLATGIRVALSSNCAKDAVKGCSSDPPNQNSQTLTMKRPAPQPPTCTSPSWAVDDLLQFSDFDSSDKKENIEFGELEWFNDIGLFGEQVPQHALAAAEVPQLPISQPSNANSYRPTKSNMPFKKPRNEIADDEEEYFTVPDLG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00147 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Eupl07g00147 239 MobiDBLite consensus disorder prediction 200 214 - -
Eupl07g00147 239 CDD Bbox1_BBX-like 5 47 - -
Eupl07g00147 239 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Eupl07g00147 239 Gene3D Classic Zinc Finger 1 97 - -
Eupl07g00147 239 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 238 - -
Eupl07g00147 239 SMART bboxneu5 52 99 IPR000315 GO:0008270
Eupl07g00147 239 SMART bboxneu5 4 47 IPR000315 GO:0008270
Eupl07g00147 239 MobiDBLite consensus disorder prediction 119 143 - -
Eupl07g00147 239 MobiDBLite consensus disorder prediction 116 143 - -
Eupl07g00147 239 CDD Bbox1_BBX-like 57 98 - -
Eupl07g00147 239 Pfam B-box zinc finger 52 96 IPR000315 GO:0008270
Eupl07g00147 239 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Eupl07g00147 239 MobiDBLite consensus disorder prediction 200 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00147 Eupl-Chr7 3489365 3494583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00147 1 163 Orphan Transcription Factor Family AT1G06040 64.327 2.90e-66 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Eupl07g00147 zf-B_box 7.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00147 - - vvi:100257595 390.578