Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00136 ATGGCTTCTTCGTCGTCCCTTCTTCTTCCATTAGGTTCCACTTTTGCTAAAAGGGCATCTACCAATCATCAGACCCTAGCCAGACAGAGAATCCCAAGTTTGACGGTGCAATGCTCAGCTCAAAAGCATAGAACAAAAGCTGACTGGATAAGAGAATATGAATATAATGTCGCTTTAGTTAAACGTAGGGATTTGATTGGGTTGGTTTCCGGAATATCCAGTCTCTTTGCAGCCTCATTTAGTGCCAAGGGAGCTGGCTTGCCTCCAGAGGAAAAGCCAAAACTATGTGATGCAGCATGTGAGAAGGAGCTTGAAAATGTCCCTTTGGTAACTACGGAGTCGGGCTTGCAGTACAAGGACTTTAAACTTGGTGAAGGTCCTAGTCCACCCGTGGGCTTTCAGGTGGCTGCAAATTATGTTGCCATGGTACCATCTGGACAAATATTTGACAGTTCTTTGGAAAAAGGCCTGCCTTATATTTTTCGTGTTGGCTCTGGTCAGGTGATCAAGGGACTTGATGAAGGGATTCTGAGCATGAAAATTGGAGGAAAACGCCGACTTTACATTCCGGGATCTATGGCTTTTCCAAAAGGTCTCAATTCGGCTCCAGGAAGGCCAAGGGTAGCTCCAAACAGTCCAGTGATTTTCGACGTGAGTTTGGAATACATACCAGGTCTCGAATTGGATGAAGAAGGTGGGTTTGCTCCGAAAATGGCGATGAGAGCTCCTCCCATTACCAGGTTAAGCTTGGCAGCATCACCATCTTCTTCGTTACAGGCCTCCTCTAACCGGCTTGTCATCGTGAAAAGACCTCTCAAAACATCGTTTTTTAATGGTGGAGTGGGAGCTCTAAAAGTTTCAGTATTACGGGTAGTCAATTCTAATAAATCCAGACGTAATGGATATGGTGGGGGAGCTCTTGGTACCCGGATGAACCTTTTTGATCGGTTTGCTAGAGTTGTCAAGTCATATGCAAATGCAATCATTAGCTCTTTTGAAGATCCTGAGAAGATCTTAGAACAAACTGTGCTTGAAATGAACGACGACTTGACAAAGATGCGTCAGGCCACGGCACAAGTGTTGGCATCTCAGAAGCGGTTGGAAAACAAATACAAAGCTGCACAACAAGCTTCTGAAGATTGGTATCGTAGGGCGCAACTTGCTCTTGGGAAAGGAGACGAGGATCTTGCTCGTGAAGCTCTCAAAAGGCGTAAATCTTATGCTGATAATGCAAGTGCTTTGAAGTCTCAGCTTGATCAGCAGAAGAATGTTGTCGAGAATCTTGTCTCCAATACTCGGCTTCTGGAGAGCAAGATACAGGAGGCAAGGTCAAAGAAAGATACTCTCAAAGCACGTGCTCAGTCTGCAAAGACTGCAACCAAAGTGAATGAGATGTTGGGGAATGTCAATACGAGTAGCGCTCTTTCAGCTTTCGAGAAGATGGAGGAAAAGGTGTTGTCCATGGAGTCCCAAGCAGAGGCACTTAATCAGTTAACCACTGATGATCTTGAAGGAAAGTTTGCATTGCTAGAGAGCTCATCAGTTGATGATGATCTTGTGAACTTGAAGAAAGAACTGTCGGGCAGTTCAAAGAAAGGAGAACTTCCCCCTGGAAGAACGGCTGTTAGTAGCACAAACACGGCATTTCCTTTTCGAGACACAGAGATTGAGATGGAGCTCAATGAACTAAGGAGAAAGGCCAAGGACTTTTAG 1713 0.4507 MASSSSLLLPLGSTFAKRASTNHQTLARQRIPSLTVQCSAQKHRTKADWIREYEYNVALVKRRDLIGLVSGISSLFAASFSAKGAGLPPEEKPKLCDAACEKELENVPLVTTESGLQYKDFKLGEGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGLPYIFRVGSGQVIKGLDEGILSMKIGGKRRLYIPGSMAFPKGLNSAPGRPRVAPNSPVIFDVSLEYIPGLELDEEGGFAPKMAMRAPPITRLSLAASPSSSLQASSNRLVIVKRPLKTSFFNGGVGALKVSVLRVVNSNKSRRNGYGGGALGTRMNLFDRFARVVKSYANAIISSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEDWYRRAQLALGKGDEDLAREALKRRKSYADNASALKSQLDQQKNVVENLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVNEMLGNVNTSSALSAFEKMEEKVLSMESQAEALNQLTTDDLEGKFALLESSSVDDDLVNLKKELSGSSKKGELPPGRTAVSSTNTAFPFRDTEIEMELNELRRKAKDF* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00136 570 Coils Coil 553 570 - -
Eupl07g00136 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 132 224 IPR001179 GO:0003755
Eupl07g00136 570 MobiDBLite consensus disorder prediction 527 547 - -
Eupl07g00136 570 Coils Coil 478 498 - -
Eupl07g00136 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 132 220 IPR001179 GO:0003755
Eupl07g00136 570 Coils Coil 411 459 - -
Eupl07g00136 570 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 238 570 IPR007157 -
Eupl07g00136 570 Coils Coil 364 384 - -
Eupl07g00136 570 Gene3D - 94 223 IPR046357 GO:0003755
Eupl07g00136 570 SUPERFAMILY FKBP-like 97 220 - -
Eupl07g00136 570 Pfam PspA/IM30 family 312 506 IPR007157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00136 Eupl-Chr7 3120852 3141365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00136 113 220 Calmodulin-binding Proteins AT3G25230 38.532 3.24e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00136 K03969 - ming:122067105 521.546