Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00107 ATGGCAGAAAGTTCTAACAATGTAGAATCAAGCGAAAATGATTCATGGGATCTTAACTTAGATCTGGTTGAAGGTGAGGAAATTGCTCAACATACTATGGTTGAGGATGAGGAAGTTTCCCAAGATACCATTGCCAAGGATAAAGAAGTTCATGCGCCAAAAGTTGGTATGGTGTTCCGATCGGAAAATGAAGCTTACAATTTTTACAATGAATATGCTAGGAGGATGGGATTTAGTATTCGAAAAAACAGTACACAACGAGTTAAAAGTGGTAGACTTCGGACACGAGAATTTGTTTGTAGTAAAGAAGGTTTTCGGAGAAAGGATTCGAGAAGAAACGCTCCATCCAAACCACGGCCACAGACACGAACACGCTGTAAGGCCCGTATTCTATTCAAAATACAGGATAATGGGGATTGGATTGTTACTAGGTTTGTGGAAGAGCACAATCACAACTTTGTAAGTCAATTGGAAGTACATTTCTTGAGATCACAGCGAAAGATACTACCTGAACAAGCTGGATACATGAATTCAATGCGCCTTAAAGGCTGTGGCCCTACTCAAGCCTTTTCAATTATTAGTGCAGAACATGGAGGATTGCAACACCTAAACTGTACACTAAAAGATTGCGACAACTACTATCAGAAAAGGCGTAAGGAGATATATAAAGAAGGGGATGCTCAAATTGCTTTGAACTACTTTAGACGTATGCAGAGAGAGGATCCATCTTTTTCATATGCAATACAAGTAGATCAAAGCAACCAAATGTGTAATTTGGTTTGGGCAGATGCTAAGTCCAAAATAGACTACGACTTTTTTGGTGATGTTGTTTGTTTTGACACAACCTTTCGAACAAATAAATATGGTATGCCTTGTGCACCGATAGTTGGAGTTAATCATCATGGAATGCCCGTTCTCTTTGGATGTGCTTTGATTTTGTTGGAGTCCACTGAATCTTTTGTTTGGGTGTTTGAGTCATTTTTTAATATGATGTCTGGAAAACAACCCAAGACAATTCTCACCGACCAAGGTCAAGCGATTGCCAATGCAATAAAAAAGGTATTGCCAAGTACACATCATCGTCTTTGCTTGTGGCATATATATCAAAATGCCGCTAAGCACCTCTCTCATGTCTACAGACGTAACAAGATATTTAAGGAGGACTTCCAGAAATGCATTTATAATGCCGAGACAGAAGAGGAATTCCAGTTAAAGTGGGAGTCTATGCTTGACAGATATGGTTTGTCTAGTCATGAATGGTTAAGAAGCTTGTATGGGGTAAGACAAAAATGGGCTCCAGTGTATGGAAGAGAACACTTCTCTGCTGGCATGACAACAACTCAACGGAGTGTAAGTGTAAACAGTTTCTTCAAGGGTTATCTGAAGAGTACTCTATGCATCATTGATTTTATCCTACACTATGAGAAAGCAGTGTTGAGTTGGCGCCAAAACGAGGCCCAAGCAGATTTTCAGTCCAAACAAATTGATCATGTTTTGACATCTAGGTCAAATTTTGAAAAGCAAGCAGCTCAAGTATATACTAGGAATGTATTCAAAACATTCCTAGATGGGTTTAAAAATTTTGCATGCTATCTCGATTATGTCAAAGAAGAAATTGGTTCAATTTATATTCATAAGGTGGAGATGGTAAATGATGTTTGGCGTGACAGAGATCGGCGTGTGAGTTTTAACTCTAAAGATAACACAGTTGAGTGTAGTTGCAAGTCTTTTGAGTTTATAGGGATATTGTGTGTGCATGCATTGAGAGTATTACTTTCAAGGCGCATTTTTCAAATCCCATCACGGTATATTTTGAAGAGGTGGACGAAAGATGCTAAGGTTGGTGTTGTAATTGATGATGCTGGTATCACCATACAAGCTGATCGATACAGCAGTGACCTGGCCCATAGAGCGCTTACTATTGTAGTTAAGGGAGTTGTTGATGAAGGATCCAGTCTAGTGGTGAAACGCCATCTAGCTGCGTGCTTAGAAGAATTGGATGCATATCAAAGAAAAACAACACTCAAGGATATGCACGTTGAATGTCAAGAACATGAAATTATTGAGGAAGTAAGTGAAGCGCACCACACAGATTACCATATGACTTTGAGGGATCCGCCAGCAAAGAAAAAAAAAGGTGAACAAAATGAAAAATTTAAGAGTGCATTGGAGAAGAATTCGAGGAAGGCCCAAAAAGAACTCAAAGATTATATAGAATCTGCACCACCTTCTGCATCTCTCTCTCTTGGAGGCCTTGTTCCACCAACAATGTCGCTTATGCCTAGCCAGGGATTATCTAGGCCCTATGATCAAACAGTCATGATCAACCCTGGCTCAGTTGATTTCCATTTCAATCAGGTGAGAGAGTCTAATGATGACTTATTTGTCTGGAATATGGTAATCCGCAATTGTGATGGATAA 2421 0.3945 MAESSNNVESSENDSWDLNLDLVEGEEIAQHTMVEDEEVSQDTIAKDKEVHAPKVGMVFRSENEAYNFYNEYARRMGFSIRKNSTQRVKSGRLRTREFVCSKEGFRRKDSRRNAPSKPRPQTRTRCKARILFKIQDNGDWIVTRFVEEHNHNFVSQLEVHFLRSQRKILPEQAGYMNSMRLKGCGPTQAFSIISAEHGGLQHLNCTLKDCDNYYQKRRKEIYKEGDAQIALNYFRRMQREDPSFSYAIQVDQSNQMCNLVWADAKSKIDYDFFGDVVCFDTTFRTNKYGMPCAPIVGVNHHGMPVLFGCALILLESTESFVWVFESFFNMMSGKQPKTILTDQGQAIANAIKKVLPSTHHRLCLWHIYQNAAKHLSHVYRRNKIFKEDFQKCIYNAETEEEFQLKWESMLDRYGLSSHEWLRSLYGVRQKWAPVYGREHFSAGMTTTQRSVSVNSFFKGYLKSTLCIIDFILHYEKAVLSWRQNEAQADFQSKQIDHVLTSRSNFEKQAAQVYTRNVFKTFLDGFKNFACYLDYVKEEIGSIYIHKVEMVNDVWRDRDRRVSFNSKDNTVECSCKSFEFIGILCVHALRVLLSRRIFQIPSRYILKRWTKDAKVGVVIDDAGITIQADRYSSDLAHRALTIVVKGVVDEGSSLVVKRHLAACLEELDAYQRKTTLKDMHVECQEHEIIEEVSEAHHTDYHMTLRDPPAKKKKGEQNEKFKSALEKNSRKAQKELKDYIESAPPSASLSLGGLVPPTMSLMPSQGLSRPYDQTVMINPGSVDFHFNQVRESNDDLFVWNMVIRNCDG* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00107 806 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 665 IPR031052 GO:0006355
Eupl07g00107 806 Pfam FAR1 DNA-binding domain 67 154 IPR004330 -
Eupl07g00107 806 ProSiteProfiles Zinc finger SWIM-type profile. 559 595 IPR007527 GO:0008270
Eupl07g00107 806 MobiDBLite consensus disorder prediction 704 727 - -
Eupl07g00107 806 Pfam MULE transposase domain 276 370 IPR018289 -
Eupl07g00107 806 Pfam SWIM zinc finger 565 593 IPR007527 GO:0008270
Eupl07g00107 806 SMART 26again6 570 597 IPR006564 GO:0008270
Eupl07g00107 806 Coils Coil 720 740 - -
Eupl07g00107 806 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00107 Eupl-Chr7 2661958 2669029 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl07g00107 MULE 2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00107 - K17604 psom:113336801 587.03