Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00105 ATGCCGAAGCAAATCCACGAGATCAAGGATTTTCTTCTCACAGCGAGAAGAAAAGATGCACGTTCTGTCAAAATTAAGAGGAGCAAAGATGTGGTCAAGTTCAAGGTCCGCTGCTCCAAGTACCTGTACACGCTCTGCGTGTTTGATTCAGAGAAGGCAGAAAAGTTGAAGCAATCTCTTCCTCCAGGTTTGAGCGTGCAAGACCTGTGA 210 0.4619 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSLPPGLSVQDL* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00105 69 FunFam 60S ribosomal protein L38 1 69 - -
Eupl07g00105 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Eupl07g00105 69 Gene3D - 1 69 IPR038464 -
Eupl07g00105 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00105 Eupl-Chr7 2606313 2609006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00105 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 6.68e-44 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00105 K02923 - jre:109000539 137.887