Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00104 ATGGATGCTGCCCTTTACACTCCAAAGCTATCACACTTCTTATACTCCAGCCAACCAGGCAATGGTCGAGTAGACATGCAAAACACCAATCAGCCTCAAACCAGTCATACATCGAGTAGTCGTTCATCGGAGTCTGGTGACCTCGGAGGAACTGGGAAATGGGCGTCGAGGCTTCTCCGAGAGTGCGCGAAGGCTATCTCTGAAAAGGACTCTAGTAAGATCCACCACCTTCTATGGATGTTGAACGAGCTCGCATCCCCTTATGGAGATTGTGATCAAAAGTTGGCTTCTCATTTCTTACAAGCGCTCTTCTGTAAGGCGACTGAATCGGGCAACCGCTGCTACAAGACTTTGACATCGGTCGCGGAGAAGAGCCACTCCTTTGAATCTGGCAGGAAGGTGATACTAAAGTTTCAAGAGGTGAGCCCTTGGACAACGTTTGGTCATGTAGCCTCAAATGGGGCTATTTTGGAGGCCTTGGATGGGGAAACTAAACTACACATAATTGATATTAGCAACACTTTTTGCACTCAATGGCCTACTTTGTTAGAAGCCTTGGCTACAAGGAATGATGAGACACCACATTTAAAGCTAACAGTGGTGGTAACAGTGGGAATGGCAAGGTCAGTCATGAAGGAGATAGGCCAGAGGATGGAGAAGTTTGCAAGGTTGATGGGAGTCCCCTTCGAATTTCATGTCGTAACTGGATTAGCGCGCCTAGGGGAACTCACTGAAGAGGAACTGGGGATACAAGAAGGTGAGGCCATTGCAGTGAACTGTGTTGGAGCCTTGCGAAGGGTCACTGTCGAGGAGCGTAGCGCCGTTGTTCGCATGCTTCACGCACTTCGGCCTAAAGTGGTGACTGTGGTTGAGGAGGAGGCTGATTTCACTAGCTCAAGGGATGACTTTGTCAAGTGCTTTGAAGAGTGCCTAAGGTTTTATACTTTGTTTTTTGAGATGCTAGAGGAGAGCTTTGTCCCTACTAGTAATGAAAGGTTGATGCTGGAGAGGGAATGCTCCAGGAGCATAGTTAGTGTGTTGGCTTGTGATAGTGATGGTAGTGGTGAAGAGTCAGAGAGAAGGGAAAGGGGGAGCCAATGGTGTGAGAAGCTGAAGGAGACCTTCACACCAGTTGGATATAGCGACGACGTGGTCGACGATGTAAGGGCTCTCCTAAAGAGGTACCAAGCAGGGTGGGCACTCCTGCCAGCTCAAGGGGATGACTCTGGGCTTTACTTGACATGGAAGGAGGAACCTGTTGTATGGGCTTCAGCCTGGAAACCCTAG 1287 0.4911 MDAALYTPKLSHFLYSSQPGNGRVDMQNTNQPQTSHTSSSRSSESGDLGGTGKWASRLLRECAKAISEKDSSKIHHLLWMLNELASPYGDCDQKLASHFLQALFCKATESGNRCYKTLTSVAEKSHSFESGRKVILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDISNTFCTQWPTLLEALATRNDETPHLKLTVVVTVGMARSVMKEIGQRMEKFARLMGVPFEFHVVTGLARLGELTEEELGIQEGEAIAVNCVGALRRVTVEERSAVVRMLHALRPKVVTVVEEEADFTSSRDDFVKCFEECLRFYTLFFEMLEESFVPTSNERLMLERECSRSIVSVLACDSDGSGEESERRERGSQWCEKLKETFTPVGYSDDVVDDVRALLKRYQAGWALLPAQGDDSGLYLTWKEEPVVWASAWKP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00104 428 MobiDBLite consensus disorder prediction 17 50 - -
Eupl07g00104 428 Pfam GRAS domain family 57 427 IPR005202 -
Eupl07g00104 428 MobiDBLite consensus disorder prediction 17 49 - -
Eupl07g00104 428 ProSiteProfiles GRAS family profile. 46 427 IPR005202 -
Eupl07g00104 428 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 55 416 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00104 Eupl-Chr7 2565741 2567570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00104 30 428 GRAS Transcription Factor Family AT4G37650 52.758 1.77e-149 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl07g00104 GRAS 2e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00104 - - msin:131240180 682.174