Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00095 ATGGACTACTCCTTTACTTCTAGAGAAAAGGGATTTAGTTATTGGGCTTCTTCGTCGCAAGATCAGAATCAGATGGATGGTTTCACATCTTTGGAGGGTGGAATGGGGAACCCGATTATCGAGGATCCATTTACCAACTTTTCAGAGCTCATGAATTTCGATATTTATGCCGAATTCTGCAGAAGCCCCTCATTTGCTGACCAGGTTCTACCATCACATGGTCTGTCTGCTGTTCAACCAATGCCCGGTTCTTTTACTTCTTTTTCTCCGTTAAATTTCAATGGTGTTTTCCCTACAGCCGATGGAGGTTCTGTAAATGCGGTTGGGGGTTCTTCGAGTTGTGGGGATAAGCTGATATTTCAACAAACTGATACCCAGATTGAGTTTCCAGCAAATTCAGCTGATGCAAATGAACTGAGTACTAAAAAAAGCAATAGTTCTTTTCCAGCAGCTAGTATTACGGGTATGGAGAATGGTACGATCCCCAGGCCGCTTGAGTGGTCACTTGCTGACAAGATGCTTAGGGCATTATCTTTGTTTAAGGAATCATCTGGAGGGGGCATTCTTGCTCAAGTTTGGGTGCCTGTTAAGCATGGAGATGAGTTCCTTTTAAGTACTTGTGAGCAACCTTACTTGCTAGACCAAATGCTTGCAGGATATCGTGAAGTATCAAGAGCATTTACCTTCTCCACAAAAGAAACACCGGATTCTTTCCTTGGGCTTCCTGGACGTGTCTTTATCTCTAGAATGCCAGAATGGACTTCAAATGTAGTCTATTACAGCAAGGCTGAGTACGTGCGTGTAAAACATGCGCTTCACCATGAAGTCCGTGGATCCCTTGCCTTACCAATTTTCAATTCCCACGAGCAGTCTTGTTCTGCTGTCTTGGAACTCGTTACTATGAAGGAGAAACCCAATTTTGATCCAGAGATGGAAAATGTTTGTCGTGCACTTCGGGCTGTGAACTTAAGGACCATTGCACCACCTCGAGTTCATTCACAGTGCCTCTCAAAGAGCAAGAGAGCTGCCTTAGCTGAGATAGTTGACGTTTTAAGAGCTGCATGTCATGCACACAGGTTACCATTGGCCCTGACATGGATGCCTTGTAGCTACACTGATGAAATTAATGATGAATGCGCGAAAGTCTGTGTGAGAGAGGGTGATACTTATTTGAGCAAGAAAAATATACTGTGTATTGAGGATACGGCATGTTATGTGAACAATGCAGAGATGCAAGGGTTTGTGCATGCATGCTCTGAACATTACCTTGAGAAAGGGAAAGGGATTGCTGGAAAAGCACTTCAATCGAACCATCCCTTTTTCTACCCCGACATAAAAGAGTATGATATAAAAGAGTATCCTCTTGTACATCATGCACGGAAGTTTGGTTTGAATGCTGCCGTTGCAATCAAGCTAAGGAGTACCTACACTGGCGATGATGATTACATATTAGAGTTCTTTCTCCCTATCAATTGCAAAGGGAGTTTGGAGCAGCAGTTGTTGTTAAACAGCCTCTCCAGTACCATGCAAAAAATTTGTAGGAGTTTAAGAACTGTTTCAGATGCGGAATTAGTTGGGGCCGAGGACACTGTAGAGATTCAGAAGGGAGTAGGAATGAGTTTACCTCCAAGGGTTTTGTCTGGGAAAATCTCTCAACCAACATTATCAGATAACGAATTGGATTCAGGTGACAGGGTTCCCTTGCATATTCCTAATCCTAGGAGTGATCGGATGGAAGCGGATGTTCCTCATGAGCAGACAACAAGTGGATCAAGGAGACAGGTGGAGAAAAAGCGGAGTACAGCAGAGAAGAATATTAGCTTGAACGTTCTTCAGCAATACTTTTCTGGGAGCCTTAAGGATGCTGCAAAAAGCATTGGTGTTTGCCCTACCACACTGAAAAGGATATGCAGACAGCATGGAATCTCAAGATGGCCATCTCGCAAGATAAACAAGGTAAACCGCTCATTAAGGAAGATACAGACTGTGATTGACTCTGTGCAAGGAGTAGAGGGAGGATTGAAGTTTGACCCCATCACCGGGGGGCTTGTTGCAGCAGCCTCCATGGTCCAAAATTTGGAGGCACGCAACAACTCTCCTAACAATACCCCGACTTCCAGAAATTCTGAATCAGCAGCCCAAGTATCTTTGGTCCCTAGTAATGAGGGTGAGAATTCTGCTGTGAAATTGGAAGGGGACGAATGTTCTGTGGGTGGGCACCAACTTGGGGCTGTAGGGCATATGCGTCTCTCTAATACATGCGAGGGAGAAAAAGAGAGAGCAAATATCCCTCTGATCGACTGTAGCGATGCTTCCAAATTTGCTGCTTTAGAGACGGGATCATTACAGCCAGTTAACCTCGAAACTATGCAGTGGGTGTCTTCTAAAGATATCTCACAGGGTCTTTGTTTTGCAAAGGAGAGATTCAACAGGTGGGGTTCAAGTAAGGGTGGTTTGAGTTTAGAGAGCTCCGACTGCCACATTACGTCCCGAAGCTCGAGCTCCATGGCAGCAGCTGATGAGATGGATATTGGTATGGATGGTGATGATGGGGTAGTCGAACATAACCAGCCAACTTCTTCAGGCATGACGGGTTCATCAAATGGCTCAGGTTCAATGATGAATGGCAGCGCATCAAGCTCGCCAACCATCCACATGCAGAAACATTCAAAAAGCAAAACATGTGTCAGAGACAGCGAATCTGCAATTACTGTGAAGGCTACTTATAAAGAGGACACAGTGAGGTTTAAGTTTGAGCCTTGCACAGGGTGTTTCCAATTGTTTGAGGAAGTTGGAAAGAGGTTCAAATTGTGTAATGGGACATTCCAGCTCAAGTACCTGGATGACGAGGAGGAGTGGGTGATGTTGGCGAGCGAGTCTGATTTGGAGGAGTGTCTAGAGATACTGGAGTCTATTGGGTCTCGTAGTGTTAAGCTCATGGTCCGTGATTTGCCTTGTGCGGGGGGCAGCTCTGCCAGTAGTAATTGTTTCTTGACAGGAGGCTTATAA 3009 0.4493 MDYSFTSREKGFSYWASSSQDQNQMDGFTSLEGGMGNPIIEDPFTNFSELMNFDIYAEFCRSPSFADQVLPSHGLSAVQPMPGSFTSFSPLNFNGVFPTADGGSVNAVGGSSSCGDKLIFQQTDTQIEFPANSADANELSTKKSNSSFPAASITGMENGTIPRPLEWSLADKMLRALSLFKESSGGGILAQVWVPVKHGDEFLLSTCEQPYLLDQMLAGYREVSRAFTFSTKETPDSFLGLPGRVFISRMPEWTSNVVYYSKAEYVRVKHALHHEVRGSLALPIFNSHEQSCSAVLELVTMKEKPNFDPEMENVCRALRAVNLRTIAPPRVHSQCLSKSKRAALAEIVDVLRAACHAHRLPLALTWMPCSYTDEINDECAKVCVREGDTYLSKKNILCIEDTACYVNNAEMQGFVHACSEHYLEKGKGIAGKALQSNHPFFYPDIKEYDIKEYPLVHHARKFGLNAAVAIKLRSTYTGDDDYILEFFLPINCKGSLEQQLLLNSLSSTMQKICRSLRTVSDAELVGAEDTVEIQKGVGMSLPPRVLSGKISQPTLSDNELDSGDRVPLHIPNPRSDRMEADVPHEQTTSGSRRQVEKKRSTAEKNISLNVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLRKIQTVIDSVQGVEGGLKFDPITGGLVAAASMVQNLEARNNSPNNTPTSRNSESAAQVSLVPSNEGENSAVKLEGDECSVGGHQLGAVGHMRLSNTCEGEKERANIPLIDCSDASKFAALETGSLQPVNLETMQWVSSKDISQGLCFAKERFNRWGSSKGGLSLESSDCHITSRSSSSMAAADEMDIGMDGDDGVVEHNQPTSSGMTGSSNGSGSMMNGSASSSPTIHMQKHSKSKTCVRDSESAITVKATYKEDTVRFKFEPCTGCFQLFEEVGKRFKLCNGTFQLKYLDDEEEWVMLASESDLEECLEILESIGSRSVKLMVRDLPCAGGSSASSNCFLTGGL* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00095 1002 MobiDBLite consensus disorder prediction 856 891 - -
Eupl07g00095 1002 CDD PB1_NLP 903 983 IPR034891 -
Eupl07g00095 1002 ProSiteProfiles PB1 domain profile. 902 984 IPR000270 GO:0005515
Eupl07g00095 1002 Pfam PB1 domain 903 983 IPR000270 GO:0005515
Eupl07g00095 1002 Gene3D - 898 985 - -
Eupl07g00095 1002 MobiDBLite consensus disorder prediction 856 889 - -
Eupl07g00095 1002 SUPERFAMILY CAD & PB1 domains 895 985 - -
Eupl07g00095 1002 ProSiteProfiles RWP-RK domain profile. 585 673 IPR003035 -
Eupl07g00095 1002 MobiDBLite consensus disorder prediction 544 601 - -
Eupl07g00095 1002 SMART PB1_new 902 984 IPR000270 GO:0005515
Eupl07g00095 1002 MobiDBLite consensus disorder prediction 695 721 - -
Eupl07g00095 1002 Pfam RWP-RK domain 605 653 IPR003035 -
Eupl07g00095 1002 PANTHER PROTEIN NLP8 114 994 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00095 Eupl-Chr7 2415952 2428257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00095 1 1002 NLP Transcription Factor Family AT2G43500 48.028 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Eupl07g00095 PB1 1.1e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00095 - - ming:122069289 1238.4