Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00088 ATGGGAAAGAAAGGGAGTTGGTTTTCTGCAATCAAGAGGGCTTTCACACCCAACTCTAAAGAGAAGCTAGTCAATGGATCGGAGAAGAGAAATGCCAAGGAGAAGAAGAAGTGGGAAGTAGGGAAGCCAAGGTATGGAGAGACAACTTCCTTCATCCCCCTCTACAGAGAACCGAGCAGTATCGAAAAAATACTGGGGGATGCCGAGAGGGATCAACAGAAAACACATCTCGTGTCTTCCGTTCATGGAATCAGAACACCGTCCATGCCTTCTAGGGTTGTTCATCACCGTAAAGAAGCTAACTACAACCCACCCACTCCAAAGAATCACCACATTGCAGCCATCAAGATCCAAGCAGCCTACAGAGGTTACATGGCTAGAAGGAGCTTCAGAGCTCTGAAGGGTCTAGTGAGACTTCAGAGAGTGATGAGAGGGCATAGCGTGAGGCACCAGACCATGAACGCGATGAAATGCACGCAACTCCTTGTGAAAGTTCAATCACAAATACAGTCGCGAAGGATTCAGATGTTGGAAAACCAAACTCTGCAAAGCCAGAATTCACACAAGAATGACAAGGAACTGGAGAGTAGCTTGCGCAGGTGGATCTTGACTCAACCATCTGAAACAGGCCAAGAAGAAGAATGGGATTATAGCTTGCTCACAAAAGAGGAAATAGATGCAAGGATGCAAAGGAAGGTGGAGGCTGTCATCAAGAGAGAGAGGGCGTTGGCCTATGCTTATTCCCAGCAGTTATGGAAAGCCACTCCTAAATCAGCTCAGACAGCTCTAATGGAGATTCAGTCTGGTGGGTTCCCATGGTGGTGGAGTTTTTTAGAACGACAACTACCAGGACATCCTTCAGAAAGCGAAGTCATACAAGCAAAGAAAGATTATCTAACACCTCCCAAGCCAATTCTGGAACCTGATATGCAACCACAATCGAGCAACTATAAGCAAACAAGATCTGCATTCGACAATCGTGATACACTTACACCTAGATCTTCGAAATCAGTGGTAGCGACGATGACTAAAACAAAGCCCATACCACTGACACCAAGAACACCACAGACAAATAGCTCTACCCCAGTGAAACATGCAAAACCAAGAACAAAGTTTACAGATTTTTCATTTGATGTGCCATTGAGGGACGACGAGAGCCTCACAAGCTGCCCGCCATTTTCAGTTCCAAATTACATGGCGCCAACTATTTCGGCTAAAGCGAAAGCAAGAACTCCCAGTCCCAGGGAGAGATTAGCATCAACACCGACAACGACTTACGAACAGAAGAGGCGGTTCTCATTTCCTCTGACTCAGAGCATTGGGTCTATAAAGTGGAACAAGGGCTCCTTTTTCACAAAAAAGGATTCTAGCTCTCAGAGGATACAAGGGAAGCACAAGTCTACTCATTCTATAGGTAATTTGAGTATTGATTCCACCATTTCTTTGCCTGCTGGAGTTGGAAGGAAGCCATTCAAGTGA 1479 0.4571 MGKKGSWFSAIKRAFTPNSKEKLVNGSEKRNAKEKKKWEVGKPRYGETTSFIPLYREPSSIEKILGDAERDQQKTHLVSSVHGIRTPSMPSRVVHHRKEANYNPPTPKNHHIAAIKIQAAYRGYMARRSFRALKGLVRLQRVMRGHSVRHQTMNAMKCTQLLVKVQSQIQSRRIQMLENQTLQSQNSHKNDKELESSLRRWILTQPSETGQEEEWDYSLLTKEEIDARMQRKVEAVIKRERALAYAYSQQLWKATPKSAQTALMEIQSGGFPWWWSFLERQLPGHPSESEVIQAKKDYLTPPKPILEPDMQPQSSNYKQTRSAFDNRDTLTPRSSKSVVATMTKTKPIPLTPRTPQTNSSTPVKHAKPRTKFTDFSFDVPLRDDESLTSCPPFSVPNYMAPTISAKAKARTPSPRERLASTPTTTYEQKRRFSFPLTQSIGSIKWNKGSFFTKKDSSSQRIQGKHKSTHSIGNLSIDSTISLPAGVGRKPFK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00088 492 MobiDBLite consensus disorder prediction 309 366 - -
Eupl07g00088 492 Gene3D - 109 160 - -
Eupl07g00088 492 MobiDBLite consensus disorder prediction 19 40 - -
Eupl07g00088 492 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Eupl07g00088 492 PANTHER IQ-DOMAIN 5-RELATED 1 437 - -
Eupl07g00088 492 SMART iq_5 109 131 IPR000048 GO:0005515
Eupl07g00088 492 ProSiteProfiles IQ motif profile. 134 160 IPR000048 GO:0005515
Eupl07g00088 492 Pfam IQ calmodulin-binding motif 113 131 IPR000048 GO:0005515
Eupl07g00088 492 Pfam Protein of unknown function (DUF4005) 355 454 IPR025064 -
Eupl07g00088 492 MobiDBLite consensus disorder prediction 305 366 - -
Eupl07g00088 492 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00088 Eupl-Chr7 2167907 2172885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00088 1 491 IQD Protein Family AT3G59690 45.796 1.33e-127 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00088 - - nnu:104586996 604.364