Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00064 ATGGCTCTGTGCTCAGCTGAAGAAGCCTTCCCATCCTATCGTGGCATCCCAACTGCTATCAGTTGCCTAGCAACTTTGCTGAAGGAACCGTTAGTCAGATATTCATTTGTGCAAGCAGATGGGGTGAAGCTGCTCATTCCATTGATTTCTCCAGCATCAACCCAACAATCTATCCAGCTCCTTTACGGAACATGCCTCTGTGTTTGGCTCTTGTCCTACTACGAACCTGCAGTGGAGTACCTGGCTACATCTAGGACTGTGCCACGATTAGTGGAGGTCGTTAAAGGTTCGACTAAGGAGAAGGTAGTGAGGGTTGTTGTCTTGACCCTTAGGAACTTGCTCTCCAAAGGGACATTTGGGGCTCAAATGGTGGATCTTGGATTGCCACAAATTGTTCAGAGTTTGAAAGCCCAGGCATGGAGTGATGAGGACCTGTTGGAGGCTCTGAATCAACTGGAAGAGGGGCTTAAAGATAATATTAAGAAACTGAGTTCTTTTGACAAGTACAAGCAGGAAGTCCTTCATGGCCATCTCGATTGGTCGCCCATGCACAAAGATCCAATTTTCTGGCGTGAAAACATTACAAACTTCGAAGAGAATGATTTCCAGATTCTTCGGGTCCTCATCACGATCCTTGACACATCCGGCGATCCTAGAGCACTAGCTGTTGCTTGCTATGACCTCTCACAGTTCATCCAGCACCATCCGGCCGGGCGGATCATAGTGACTGATCTCAAGGCTAAGGAGCGGGGGATGAAGCTGATGAATCATGAGAATGCAGAGGTTACAAAGAATGCCCTTCTCTGTATCCAGAGGCTTTTCCTTGGCGCGAAATATGCGAGTTTTTTGCAGGCGTAA 858 0.4767 MALCSAEEAFPSYRGIPTAISCLATLLKEPLVRYSFVQADGVKLLIPLISPASTQQSIQLLYGTCLCVWLLSYYEPAVEYLATSRTVPRLVEVVKGSTKEKVVRVVVLTLRNLLSKGTFGAQMVDLGLPQIVQSLKAQAWSDEDLLEALNQLEEGLKDNIKKLSSFDKYKQEVLHGHLDWSPMHKDPIFWRENITNFEENDFQILRVLITILDTSGDPRALAVACYDLSQFIQHHPAGRIIVTDLKAKERGMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00064 285 Gene3D - 176 277 IPR038497 -
Eupl07g00064 285 SMART arm_5 28 73 IPR000225 GO:0005515
Eupl07g00064 285 SMART arm_5 74 115 IPR000225 GO:0005515
Eupl07g00064 285 SMART arm_5 235 275 IPR000225 GO:0005515
Eupl07g00064 285 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 13 284 IPR004908 GO:0000221|GO:0046961|GO:1902600
Eupl07g00064 285 Pfam V-ATPase subunit H 162 274 IPR011987 GO:0000221|GO:1902600
Eupl07g00064 285 SUPERFAMILY ARM repeat 20 275 IPR016024 -
Eupl07g00064 285 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 231 238 IPR018506 GO:0020037
Eupl07g00064 285 Pfam V-ATPase subunit H 16 156 IPR004908 GO:0000221|GO:0046961|GO:1902600
Eupl07g00064 285 FunFam V-type proton ATPase subunit H 176 277 - -
Eupl07g00064 285 Gene3D - 5 164 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00064 Eupl-Chr7 1558537 1567281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00064 11 285 Primary Pumps ATPases(2) AT3G42050 83.394 4.58e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00064 K02144 - mnt:21402594 494.582