Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00063 ATGGATCGTGCGGAGCTAACGACGGAGCAGGTTCTCAAGAGGGACATCCCATGGGAGACCTACATGACAACTAAGTTGATCACAGGAACATGCCTTCAGCTGTTAAGACGTTATGATAACAGATCTGAAAGCTACCGAGCTGCACTGCTTGATGATGATGGTCCAGCTTATGTTCGGGTGTTCGTTAACATTTTACGTGATATATATAAGGAAGAAACAGTGGAATATGTTCTAGCTCTTATTGATGAAATGCTCACAGCAAACCCAAAACGGGCCAGACTGTTCCATGAAAAATCTCTTGCAAATGAAGATACTTATGAACCTTTATTAAGTTAA 336 0.4167 MDRAELTTEQVLKRDIPWETYMTTKLITGTCLQLLRRYDNRSESYRAALLDDDGPAYVRVFVNILRDIYKEETVEYVLALIDEMLTANPKRARLFHEKSLANEDTYEPLLS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00063 111 Gene3D - 5 111 IPR011989 -
Eupl07g00063 111 SUPERFAMILY ARM repeat 8 110 IPR016024 -
Eupl07g00063 111 Pfam V-ATPase subunit H 4 110 IPR004908 GO:0000221|GO:0046961|GO:1902600
Eupl07g00063 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 110 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00063 Eupl-Chr7 1551269 1556539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00063 1 110 Primary Pumps ATPases(2) AT3G42050 77.273 1.04e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00063 K02144 - nnu:104593320 215.698