LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl07g00059	ATGCACACCTTCTTCATCCTCATCCTCCTCCTCTTCTTTTCCTGCGCACCCCACTACTTGACCTGCACTCCCATTCTCCTTCACCACCGTCGGATCCTCCATCAACCCTTCTTCCCTCAAGACTCCTTACCTCCAACCCAGTCTCCATCTTCCTCTCCTCAACCTCCCCAACCCCCACAACCCAAGTTCCCATTTTCCTCCACAACCCCAAATAAACAACCTTTCTTCCCATCTTACCCTTCCCCACCTCCCCCTCCTTCCTCTCCCAACTCTTTCGCTACATTCCCTGCTAACATTTCCTCTCTCATCTTCCCTGAAACCCCCCATCGCAAACCCATCTCCCCAAAACTCGTTGCCGTCGCTGTAATCCTCTCTCTCCTCTCTGTTGCTCTCATCGCTTCCTTACTACTCCTTTTCTATCACCGGAGACGCCGTAATGTCACCATTACCAAGACCTCCAGATCGGACAGTCACCGGTTGTTCCCTGCAAACACCGCCTCTTCAGATGGTCATCACAAGGTACGCGGTGGCGCATCGGGTGTTTCAGCAACCAGCTCTGAATTTCTCTATCTGGGTACATTGGTAAATTCTCGTGGAATCGATGGTGATGGCGGCGGAGATTCCGGCGGTGGTGTTGGTGCTGCTGCTCATGCGTCACCGTATCGGAAATTGGGTTCTCCTGAGCTTCACCCGCTTCCACCACTCGCCAGGCAGAATTTCAGGCAGAATTATGGAAATGCTGAAGTGGGTTCTTCTGGAGAAGAAGAAGAAGAGTTTTACTCTCCTAGAGGATCTTCAGGTGGAAAGGAGAGTCCAAATGGTACTGGATCGAGCTCTAGGAGGGTGTTGGCGGCGGCGGCGATGGAGAATTTTGGAAGCAGGAGCTCGAGTTCGAGTAATCCTTCATACCCAACGTCGAATTCAGCTTCTCCAACTCGTTCGGTTTCTAACAGTACTTCCCCACGAGCTAGCTTGAGCCCGACAAGCTTGCAATCGAAATCTCCAGATTCTGCGAGAAGCCTAAAATCGAAATCTCCAGATTCTGTTGCAAAGCTGCCACCGCCTCCACCCCCGCCACCACCTCGTCCGATGACCCCATCGCCTCCGAAGAGAAAACCACCTTCACCTTCTCCACCCTCTTCACCCCCAGAGAGAGATCTTGAGAAAAACTCGCATTCTCCTGCCAGAATTTCGGATTGTTCTGCCCAAAATCAGCAGTCTCCAGCAAGAATTAGTGGTGTTTCTAGGCAGCCTATTTCAATCCCACCACTGCCTCCTCCTCCTCCTCCACCCAGATACTGGGAAACCCCAGTTCCTCTGCAGATCCATGAGCCGACGATTTCTAGGCCACCAGTTCTTATTACCCCTTCGAGACCTGTTGTGTCCCAGAATCCAACAACAGTTCCTCCAGTTGAATTGCCACAGAATTCTGAAGCCTTGGAGAGAAATGAGGAGACTCCAAAGCCAAAGCTGAAGCCTTTACATTGGGATAAGGTCAGAGCAAGCTCTGATCGAGCAATGGTGTGGGATCAGCTGAGATCAAGCTCTTTCCAATTGAACGAAGAGATGATCGAGACATTGTTTGTTGTCAATACCAAAAATTTGACTCCCAAGGAAGGTTCCTGGCGTCCTGTCCTTCCGTCACCAAACCAAGAGAATAGGGTGCTCGATCCGAAGAAGTCTCAGAACATTGCAATTTTGTTGAGGGCACTCAATGTGACCATTGAGGAAGTCTGTGAAGGCCTTTTGGAAGGTAATACAGATACCTTGGGAACTGAGCTTCTTGAAAGTTTATTGAAGATGGCTCCGACCAAAGAGGAAGAGCGGAAACTGAAAGAGTACAAAGACGATTCACCGTACAAGCTTGGCCCTGCTGAGAGATTTCTCAAGGAGGTGCTTGATATTCCTTTTGCATTTAAAAGAGTGGATGCGATGCTTTACATAGCCAATTTTGATTCAGAGGTTGAGTACCTCAGAAAGTCATTCGAAACTCTAGAGGCAGCCTGCGAAGAACTGAGGAACAGCAGGATGTTTATGAAGCTTTTGGAAGCCGTACTCAAGACTGGGAACCGCATGAATGTTGGGACAAACCGCGGAGATGCCCATGCCTTCAAACTTGACACACTCCTCAAGCTGGTTGATGTCAAGGGTACTGATGGGAAGACCACCCTATTGCATTTTGTTGTACAGGAAATCATAAGAGCTGAAGGCTCTCGTCTTTCTGGTGCCAATCAGAATTCTGCTGCTGGAAAAACCCAGCAATCTAATTTCCGGGATGATGTTGAATATAGGAAACTTGGCCTGCAAGTCGTTGCTAGCCTCAGTGGGGAGCTCACCAGCGTTAAGAAGGCTGCTGCAATGGATTCTGATGTTCTTAGCAGTGATGTCTCAAAGCTTGCTAAAGGAATTGGGAACATAGGGGAGGTGGTGAGATTGAACGAATCAACAGGCTTGAAGGGGAGCAGCCAGAGATTCTCCGACTCGATGAATAGTTTTTTGAAGAAGGCAGAGGAGGAGATTATAAGGATTCAAGCCCAAGAGAGTGTTGCTCTCTCTCTAGTAAAGGAGATAACCGAATATTTCCATGGGAATTCAGCCAAGGAAGAAGCTCACCCATTCAGGATCTTCATGGTGGTCAGGGACTTTCTTTCCACTCTCGATCAGGTTTGCAAGGAAGTTGGGAAGATAAATGAACGGACGATAGTCAGTTCAGCTCGTCAATTTCCAGTGCCTGTAAATCCAACACAGCCGCCAGTTTTTCCTACATTTCATGCACTACGGCAATACAGTTCCTCCGATGATGAAAGCACATCTTCGTCTTAG	2823	0.4888	MHTFFILILLLFFSCAPHYLTCTPILLHHRRILHQPFFPQDSLPPTQSPSSSPQPPQPPQPKFPFSSTTPNKQPFFPSYPSPPPPPSSPNSFATFPANISSLIFPETPHRKPISPKLVAVAVILSLLSVALIASLLLLFYHRRRRNVTITKTSRSDSHRLFPANTASSDGHHKVRGGASGVSATSSEFLYLGTLVNSRGIDGDGGGDSGGGVGAAAHASPYRKLGSPELHPLPPLARQNFRQNYGNAEVGSSGEEEEEFYSPRGSSGGKESPNGTGSSSRRVLAAAAMENFGSRSSSSSNPSYPTSNSASPTRSVSNSTSPRASLSPTSLQSKSPDSARSLKSKSPDSVAKLPPPPPPPPPRPMTPSPPKRKPPSPSPPSSPPERDLEKNSHSPARISDCSAQNQQSPARISGVSRQPISIPPLPPPPPPPRYWETPVPLQIHEPTISRPPVLITPSRPVVSQNPTTVPPVELPQNSEALERNEETPKPKLKPLHWDKVRASSDRAMVWDQLRSSSFQLNEEMIETLFVVNTKNLTPKEGSWRPVLPSPNQENRVLDPKKSQNIAILLRALNVTIEEVCEGLLEGNTDTLGTELLESLLKMAPTKEEERKLKEYKDDSPYKLGPAERFLKEVLDIPFAFKRVDAMLYIANFDSEVEYLRKSFETLEAACEELRNSRMFMKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRAEGSRLSGANQNSAAGKTQQSNFRDDVEYRKLGLQVVASLSGELTSVKKAAAMDSDVLSSDVSKLAKGIGNIGEVVRLNESTGLKGSSQRFSDSMNSFLKKAEEEIIRIQAQESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSTLDQVCKEVGKINERTIVSSARQFPVPVNPTQPPVFPTFHALRQYSSSDDESTSSS*	941

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	419	433	-	-
	Eupl07g00059	940	PANTHER	FORMIN-RELATED	404	933	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Eupl07g00059	940	SMART	it6_source	481	901	IPR015425	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	266	280	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	42	68	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	460	491	-	-
	Eupl07g00059	940	Gene3D	Formin, FH2 domain	477	897	IPR042201	-
	Eupl07g00059	940	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	422	900	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	290	344	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	205	433	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	349	383	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	394	414	-	-
	Eupl07g00059	940	MobiDBLite	consensus disorder prediction	42	65	-	-
	Eupl07g00059	940	Coils	Coil	655	675	-	-
	Eupl07g00059	940	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	481	912	IPR015425	-
	Eupl07g00059	940	Pfam	Formin Homology 2 Domain	482	886	IPR015425	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl07g00059	Eupl-Chr7	1462343	1469700	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl07g00059	446	928	FH2 protein (formin) Gene Family	AT3G25500	74.795	0.0	719

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl07g00059	-		-	nnu:104593329	1112.06