Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00054 ATGGACATTGCTGCTCAGTTGAAGCGGGGGATTTCGCGGCAGTTCTCAACGGGGTCGATGAGGAGGAGTGGGAGGTTCAGTTTCACCCGGCAGGCCTCATTGGACCGGCGACGTAACACGTCGCGCTTCAGTTTCGGGCGGCAGTCGTCGCTCGATCCAAACCGACGGAGCCCGGTCCCAGATGAATTGACGGTGCCAGAGAATCTTGACTCGACGATGCAGCTGCTGTTCATGGCCTCCCAGGGGGATGTAAAGGGAGTCGAGGATTTGCTGAAGGAGGGTACTGATGTAAATAGCATCGATTTAGATGGACGGACTGCTTTGCATATTGCTGCTTGTGAGGGGCACATTGACGTTGTGAAGCTATTGCTGAGTCGAAAGGCCAACATAGATGCCCGCGATCGGTGGGGGAGCACGGCTGCTGCTGATGCTAAGTACTATGGAAATGTGGAAATTTACAATATTTTGAAGGCTCGAGGAGCCAAAGTTCCAAAAACCAGGAAGACACCAATGGCTGTTTCAAATCCTCGAGAAGTTCCAGAGTACGAACTTAATCCGTTAGAGCTTCAGATTCGAAAGGGTGATGGTATTTCAAAGGGATCATATCAAGTGGCTAAATGGAATGGGACAAAGGTTGCTGTAAAGATACTTGATAAGGACAGCTATTCAGATCCAGATAGCATAAATGCTTTCAAACATGAGCTGACTTTGTTGGAGAAGGTTCGACATCCTAATGTGGTTCAGTTTGTTGGAGCTGTTACTCAAAATATACCTATGATGATTGTTTCAGAGTACCATTCAAAAGGTGACCTGGGAAGCCATCTTCAAAAGAAAAGGCGTTTATCACCCCCTAAAGCTCTAAGATTTGCTCTTGATATTGCTAGGGGTATGAATTATCTTCATGAATGCAAACCGGATCCGATTATTCATTGCGATTTAAAGCCAAAAAATGTTTTGCTGGATTGTGGGGGCCAGTTGAAGGTAGCAGGATTTGGTTTGATAAAGTTGTCAAAAATATCACCTGACAAAGCAAAACTAGCACAGCCAGGGGCTCATGTTGACCCTTCAAGTTTGTACGTGGCACCTGAGGTTTATAAAGATGAGATATTCGATAGAAGTGTTGATGCGTTCTCTTTTGGTCTCATTCTTTATGAGATGTTTGAAGGAGTACCGCCATTCCACCCCAAGTCCCCAGAAGATGCTGCTAAAATAATTTGCTTAGATGGAATGAGACCACCATTCAAGATCAAATCAAAAAGCTACCCTGCAGACCTTAAAGAGTTGATTGAAGAATGCTGGGACCCAGAACCTGTGATGAGACCAACATTTTCTGAGATAATTGTAAGACTGGACAAAATCGTTGCGAACTGTTCTAAGCAGGGATGGTGGAAAGACACCTTTAAGCTTCCTTGGAAATGA 1419 0.4531 MDIAAQLKRGISRQFSTGSMRRSGRFSFTRQASLDRRRNTSRFSFGRQSSLDPNRRSPVPDELTVPENLDSTMQLLFMASQGDVKGVEDLLKEGTDVNSIDLDGRTALHIAACEGHIDVVKLLLSRKANIDARDRWGSTAAADAKYYGNVEIYNILKARGAKVPKTRKTPMAVSNPREVPEYELNPLELQIRKGDGISKGSYQVAKWNGTKVAVKILDKDSYSDPDSINAFKHELTLLEKVRHPNVVQFVGAVTQNIPMMIVSEYHSKGDLGSHLQKKRRLSPPKALRFALDIARGMNYLHECKPDPIIHCDLKPKNVLLDCGGQLKVAGFGLIKLSKISPDKAKLAQPGAHVDPSSLYVAPEVYKDEIFDRSVDAFSFGLILYEMFEGVPPFHPKSPEDAAKIICLDGMRPPFKIKSKSYPADLKELIEECWDPEPVMRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPWK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00054 472 FunFam Integrin-linked protein kinase 1 46 182 - -
Eupl07g00054 472 Gene3D Transferase(Phosphotransferase) domain 1 268 466 - -
Eupl07g00054 472 ProSiteProfiles Protein kinase domain profile. 187 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00054 472 ProSiteProfiles Ankyrin repeat profile. 103 135 IPR002110 GO:0005515
Eupl07g00054 472 SMART serkin_6 191 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00054 472 Gene3D - 66 179 IPR036770 -
Eupl07g00054 472 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 139 453 - -
Eupl07g00054 472 Pfam Protein tyrosine and serine/threonine kinase 198 449 IPR001245 GO:0004672|GO:0006468
Eupl07g00054 472 FunFam Integrin-linked protein kinase family 267 466 - -
Eupl07g00054 472 ProSiteProfiles Ankyrin repeat region circular profile. 103 135 - -
Eupl07g00054 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Eupl07g00054 472 CDD STKc_MAP3K-like 197 450 - -
Eupl07g00054 472 SUPERFAMILY Protein kinase-like (PK-like) 191 450 IPR011009 -
Eupl07g00054 472 Gene3D Phosphorylase Kinase; domain 1 181 267 - -
Eupl07g00054 472 FunFam serine/threonine-protein kinase STY46-like 184 267 - -
Eupl07g00054 472 Pfam Ankyrin repeats (3 copies) 76 163 IPR002110 GO:0005515
Eupl07g00054 472 SUPERFAMILY Ankyrin repeat 75 167 IPR036770 -
Eupl07g00054 472 PIRSF ILK 7 471 - -
Eupl07g00054 472 SMART ANK_2a 103 132 IPR002110 GO:0005515
Eupl07g00054 472 SMART ANK_2a 68 99 IPR002110 GO:0005515
Eupl07g00054 472 SMART ANK_2a 136 165 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00054 Eupl-Chr7 1192101 1225569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00054 2 471 MAP Kinase Kinase Kinase AT2G43850 78.782 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Eupl07g00054 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00054 - - ming:122091326 858.981