Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00052 ATGGCCATGAATAACAGAGCTCTTGCTGTTCTTGTCCTTACCTTTTTCTGCTTGTTGCTGAGTGCTAATGTAAGCTATGGTACGAGTAGCGATATATATTGCTTGGAAACTCTAAAAAAGTCCGTGAAAGACCCTTTGAACTACTTAAACAATTCATGGAATTTTAACAACAATACTGAAGGGTTCATCTGTAAATTTACTGGTATCGATTGCTGGCACCCGGATGAAAACAAGGTATTAAACATCCGGCTCTCAGACATGGGGCTCCAAGGCCAGTTCCCAAAGGGTCTCGAGAATTGCACGAGCATGACCGGCTTAGATCTTTCAAGCAACGAGCTCTCTGGATCAATCCCGTCGAACATCTCTAAAATTCTCCCTTATTTGACAAGCCTTGATCTCTCCTCAAACAATTTTTCTGGTGAAATACCGGTGAACATCTCAAACTTGACCTATCTGAATGTTCTTAAACTCGACAACAACCGACTGACGGGTCAAATCCCTCTGCAACTCGGCAGCCTCAATCGGCTCAAGACATTTAGTGTCACCAACAATCTCTTGACCGGGCAGATCCCAAGCTTTGTCCATAACAATTTTACAGCTGAAGACTTTGCAAATAATCCAGGACTCTGTGGGAAACCTTTAGAAGTTTGCGTGGGGCCACCGCAGAAGACTCATCCTGGAGTCATCATCGGGTCAGCGATTGGAGGGGTGGTTGTTACAACTCTAGTTGCTGGTGTTATTATCTTCTTATGTTTGCGTAGGGTGTCTAAGAAAAAGAAGGAAGTAGACCCCAAAGGAAACAAGTGGGCGAAGAGCATAAAGGGAACCAAAGCCATCAAGATTTCCATGTTTGAGAAGTCCGTTTCGAAAATGAGATTGAGTAATCTCATGAAGGCTACTGACAACTTCAGTAAAGATAACATTATTGGATCTGGGAGAACTGGTACAATGTACAAGGCAATGCTTCCAGACGGTTCTTCTCTAGTGGTTAAGAGGTTGCAAGACTCTCAACACTCTGAGAAACAATTTATATCCGAGATGAATACTCTGGGGAGTGTGAAACATCGTAACCTGGTTCCCCTCTTGGGATTTTGCATTGCCAAGAAGGAAAGGCTTCTAGTGTATAAGCACATGCTGAATGGAACTCTCCATGAGCAATTACATCCGGTGGAATCTGAGGCCAAGGTAATGGATTGGCCTCTGAGGCTCAAAATTGGGATAGGTGCAGCCAGAGGCCTGGCTTGGCTCCATCATAATTGCAACCCCCGCATTATCCATCGGAACATAAGCTCCAAATGCATCTTGTTGGATTACGATTTTGAGCCTAAAATATCTGATTTCGGACTCGCAAGGCTCATGAACCCTGTCGACACGCATTTGAGTACGTTCGTGAATGGGGAGTTTGGAGACTTGGGTTATGTTGCTCCTGAGTATGCACGGACACTAGTGGCCACTCCAAAAGGGGATGTTTACAGCTTTGGAACTGTACTTCTTGAGTTGATTACTGGTGAGAGGCCTACCCATGTGGCTAATGCCCCGGAAAGCTTCAAGGGGAATTTGGTGGAGTGGACTACTCATCTTTCAAGCAACTCTCTTCTCCAAGACGCCATTGATAAGTCTTTGGTTGGGAAGGGTGTTGATGGTGAGCTCTTCCAGTTTCTGAAAGTTGCATGTAATTGCGTCGTGCCAGATCCAAAGGAGAGACCCACAATGTTCGAAGTGTACCAACTGCTAAGAGCCATCGGGGAGAGCTACAATTTCACAGTCGATGATGAGATTTTCGTGCCATCTAACACTAGTGAAGTCGATTACCCAGATGAACTTATTGTTGCACGATAA 1839 0.4481 MAMNNRALAVLVLTFFCLLLSANVSYGTSSDIYCLETLKKSVKDPLNYLNNSWNFNNNTEGFICKFTGIDCWHPDENKVLNIRLSDMGLQGQFPKGLENCTSMTGLDLSSNELSGSIPSNISKILPYLTSLDLSSNNFSGEIPVNISNLTYLNVLKLDNNRLTGQIPLQLGSLNRLKTFSVTNNLLTGQIPSFVHNNFTAEDFANNPGLCGKPLEVCVGPPQKTHPGVIIGSAIGGVVVTTLVAGVIIFLCLRRVSKKKKEVDPKGNKWAKSIKGTKAIKISMFEKSVSKMRLSNLMKATDNFSKDNIIGSGRTGTMYKAMLPDGSSLVVKRLQDSQHSEKQFISEMNTLGSVKHRNLVPLLGFCIAKKERLLVYKHMLNGTLHEQLHPVESEAKVMDWPLRLKIGIGAARGLAWLHHNCNPRIIHRNISSKCILLDYDFEPKISDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELITGERPTHVANAPESFKGNLVEWTTHLSSNSLLQDAIDKSLVGKGVDGELFQFLKVACNCVVPDPKERPTMFEVYQLLRAIGESYNFTVDDEIFVPSNTSEVDYPDELIVAR* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00052 612 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Eupl07g00052 612 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 378 590 - -
Eupl07g00052 612 CDD TM_EGFR-like 223 260 - -
Eupl07g00052 612 FunFam Nuclear pore complex protein NUP107 28 192 - -
Eupl07g00052 612 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 580 - -
Eupl07g00052 612 Pfam Protein kinase domain 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl07g00052 612 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Eupl07g00052 612 CDD STKc_IRAK 309 578 - -
Eupl07g00052 612 SUPERFAMILY L domain-like 29 211 - -
Eupl07g00052 612 SUPERFAMILY Protein kinase-like (PK-like) 281 578 IPR011009 -
Eupl07g00052 612 Gene3D Phosphorylase Kinase; domain 1 264 377 - -
Eupl07g00052 612 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Eupl07g00052 612 ProSiteProfiles Protein kinase domain profile. 303 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00052 Eupl-Chr7 1064979 1068581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00052 6 594 Receptor kinase-like Gene Family AT3G28450 45.791 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Eupl07g00052 Pkinase 1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00052 - - ming:122063401 972.23