Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00037 ATGGCGTCGTCGTCAAATTCTCCTTGTGCAGCTTGTAAATTCCTCCGCCGCAAATGCCAACCTGAGTGCGTTTTCGCGCCATATTTTCCACCGGATCAGCCGCAGAAGTTTGCTAACGTGCACAAGGTGTTCGGTGCAAGCAATGTCACTAAGCTACTCAATGAACTTCATCCTCACCAACGAGAGGACGCCGTTAATTCCCTCGCCTATGAAGCCGATATGCGCCTCCGTGACCCGGTTTACGGTTGTGTCGGCGTTATCTCTATACTCCAGCATCAACTCCGTCAACTTCAGATGGATCTTAGTTGTGCAAAATCCGAGCTCTCCAAGTACCAGAATGTCGGCATCACCGGCCATGGACTCTTTGCTGCTGCCGCTGCCGCTGCAGCCGCTACCACCCACAATCATCAACAGATGGGGATCGGCCTCTTAACCGGCCGTGATCACCAACACCAATTTTTCTCTAGGGATCAACAACAAGCTTTTAGGAATTTCGATGCTAATGGTGCCTATGATGCAAGCTTTGTTGCTGCCATGAATGTATCTGCAAGCCTTGGACCACTGGGTCAGTTCCAACAGCCTCGAGCCGCTGGAGGTGACGATCGCCGCAGCATCGGACCTTCTTAG 627 0.5199 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISILQHQLRQLQMDLSCAKSELSKYQNVGITGHGLFAAAAAAAAATTHNHQQMGIGLLTGRDHQHQFFSRDQQQAFRNFDANGAYDASFVAAMNVSASLGPLGQFQQPRAAGGDDRRSIGPS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00037 208 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Eupl07g00037 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 147 - -
Eupl07g00037 208 MobiDBLite consensus disorder prediction 189 208 - -
Eupl07g00037 208 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Eupl07g00037 208 Coils Coil 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00037 Eupl-Chr7 740741 744221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00037 2 208 AS2 family AT1G65620 67.123 6.10e-85 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl07g00037 LOB 2.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00037 - - nnu:104593356 360.533