Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00007 ATGCCTCGTAAAGTGAGTTATGGAGTTGATTATGATTCAGACTATGACGTTTATGATGATTATGACTATGATTCAGATTTAGAAGGAGATGTAACAGAAGACACATCTAAGGTAGACCAGGCAATCACCAAGCCTGGGCTTTGGAGCTGCTCCATTTGCACATTTGATAATGATGAAAGTATATCTGTTTGTGATATCTGTGGGGTTTTTCGGGATCCCATGGTCAACACGAGCAACAATGGCAATAAAGAAACAGTTGGTGACACGTCCAAAGACTGGGGAGCATCCGTATTGGCCAAGTCTCTTTTTGCATCATTGCCTCGTCGGACGCCCGAAATGGTTGTTATCTTTCAGCAGCAAAATGACGATTTTGCGAGGAAAGAGACCATTAACTTCCACGGGATTGGAAATATCCAAGGAAATTATTATGATCTTCACAAAGCTTTTATATTTACTCATTGCAAGTACAATATAAAAATAGCACCTTTCAAGTTTGATAGCCTCTCTCCAGATGATTTGGTTTCTTCCGGCAAGCATTCCGCCAGGATAGTTTCAAAATCCAACCTTGTGGAATTGGCATCTTCGGGGGTTTCCTCAAACATCACTGGGAAGAAGGAAAAGGTTAAAATACTACCTAGCACCAAAAGGATAGAGAGTTCATCTGTCCCTTTGCCAAAAGTTGGACAACCTAGTGCAGATGAAAGCAGTTGTTCCTCGGTCAATGAGGGAAAACCACAAAGCCTAACGAGTAGTTTCAACAAAGTAAACATAAATGTAGACTCTGGATGCCTGAAGAATTATACAAATACTAGAAAAGCCACTTTACGTGCCCAATACAAGCCAGAGGCATGGATGCTTCCTGACCAAGAAGTATTGACTCAACTAAATCTTGCTATTGTTGGCCATGTTGATTCTGGAAAATCAACACTATCAGGGAGACTGCTACACCTTTTGGGGCGGATATCCCAGAAAGAAATGCATAAGTATGAAAAAGAGGCTAAACTAAAGGGAAAAGGATCCTTTGCTTATGCGTGGGCACTGGATGAGAGTGCTGAAGAACGGGAAAGGGGTATAACCATGGCAGTAGCTGTTGCTTATTTTGACTCCAAAAAATATCACGTTGTTGTGCTTGACTCACCGGGCCATAAAGATTTCGTCCCAAACATGATATCCGGTGCTACGCAAGCAGATGCTGCAATTCTTGTTATAGATGCCTCGGTCGGTTCATTTGAAACAGGTATGGATGGTAATGGAGGGCAAACAAGAGAGCATGCACAACTTATTAGAAGTTTTGGTGTTGATCAAATTATTGTGGCTATTAATAAAATGGATGCTGTGGCATACTCAAAGGAAAGGTTTGATTCAATAAAACTGCAACTTGGAACATTTCTCCGTTCTTGCGGTTTCAAGGATTCTTTTTTGTCGTGGATCCCCTTGAGTGCCATGGAAAATCAGAATTTGGTGAGAGCTGCATCTGATGTTCGTTTTTCATCTTGGTATCAGGGTCCATGTCTGTTGAATGCCATAGATTCACTGCAACCTCCCATAAGGGATATCTCACGGCCACTAATTATGCCCATTTGTGACATCATTAAGTCACATTCACTAGGGCAGGTGGCAGCCAGCGGTAAATTGGAGACTGGAGCTCTACGATGTGGTTTGAAGGTTCTAGTGATGCCGTATGGTGATTTAGCAACGGTGCGTTCCTTAGAGCGTGATTCCCAAGCTTGCACTATCGCAAGAGCTGGAGACAATGTGGCTGTCAGTCTACAAGGCATCGATGGAAGTCGTGTGACGATTGGGGGAGTGCTATGTCACCCTGATTTCCCTGTGGCTGTTGCAACCCATTTAGAGTTGAAAGTCCTCACCTTGGATATCGCAATGCCCATTTTAGTTGGCTCTCAGGTGGAATTTCATATACACCATTCGAAGGAGGCTGCAAAAGTGGTAAAGATATTGTCGTTGTTTGATCAGAAAACTGGAAATGTCTCAAAAAGGGCACCCCGCTGTCTTGCTGCCAAGCAGAGTGCATTGATAGAGGTGATTCTGGATGGAGCAGTTTGTGTGGAAGAATTCTCTGATTGTCGAGTTCTTGGGAGGGTGTTCCTACGAGCATCTGGGAGAACTGTTGCTGTAGGGATTGTAACTCGAATAATTGAGTAG 2163 0.4313 MPRKVSYGVDYDSDYDVYDDYDYDSDLEGDVTEDTSKVDQAITKPGLWSCSICTFDNDESISVCDICGVFRDPMVNTSNNGNKETVGDTSKDWGASVLAKSLFASLPRRTPEMVVIFQQQNDDFARKETINFHGIGNIQGNYYDLHKAFIFTHCKYNIKIAPFKFDSLSPDDLVSSGKHSARIVSKSNLVELASSGVSSNITGKKEKVKILPSTKRIESSSVPLPKVGQPSADESSCSSVNEGKPQSLTSSFNKVNINVDSGCLKNYTNTRKATLRAQYKPEAWMLPDQEVLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLKGKGSFAYAWALDESAEERERGITMAVAVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGSFETGMDGNGGQTREHAQLIRSFGVDQIIVAINKMDAVAYSKERFDSIKLQLGTFLRSCGFKDSFLSWIPLSAMENQNLVRAASDVRFSSWYQGPCLLNAIDSLQPPIRDISRPLIMPICDIIKSHSLGQVAASGKLETGALRCGLKVLVMPYGDLATVRSLERDSQACTIARAGDNVAVSLQGIDGSRVTIGGVLCHPDFPVAVATHLELKVLTLDIAMPILVGSQVEFHIHHSKEAAKVVKILSLFDQKTGNVSKRAPRCLAAKQSALIEVILDGAVCVEEFSDCRVLGRVFLRASGRTVAVGIVTRIIE* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00007 720 ProSiteProfiles Zinc finger RanBP2 type profile. 44 73 IPR001876 -
Eupl07g00007 720 Gene3D - 288 516 IPR027417 -
Eupl07g00007 720 PRINTS GTP-binding elongation factor signature 296 309 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 PRINTS GTP-binding elongation factor signature 375 385 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 PRINTS GTP-binding elongation factor signature 355 363 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 PRINTS GTP-binding elongation factor signature 391 402 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 PRINTS GTP-binding elongation factor signature 436 445 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 SMART zf_4 46 70 IPR001876 -
Eupl07g00007 720 Gene3D - 42 83 - -
Eupl07g00007 720 Pfam Elongation factor Tu GTP binding domain 295 510 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 SUPERFAMILY Ran binding protein zinc finger-like 45 71 IPR036443 -
Eupl07g00007 720 PANTHER TRANSLATION FACTOR 293 718 - -
Eupl07g00007 720 Pfam Elongation factor Tu C-terminal domain 618 718 IPR004160 -
Eupl07g00007 720 Gene3D Translation factors 613 720 - -
Eupl07g00007 720 FunFam Translation elongation factor EF-1 519 609 - -
Eupl07g00007 720 FunFam Elongation factor 1 alpha-like protein 286 516 - -
Eupl07g00007 720 FunFam elongation factor 1-alpha isoform X4 613 720 - -
Eupl07g00007 720 SUPERFAMILY Translation proteins 514 609 IPR009000 -
Eupl07g00007 720 ProSitePatterns Zinc finger RanBP2-type signature. 48 67 IPR001876 -
Eupl07g00007 720 Gene3D Translation factors 520 609 - -
Eupl07g00007 720 MobiDBLite consensus disorder prediction 220 247 - -
Eupl07g00007 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 294 537 IPR027417 -
Eupl07g00007 720 CDD HBS1_C_III 610 718 - -
Eupl07g00007 720 CDD EF1_alpha 296 515 - -
Eupl07g00007 720 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 292 523 IPR000795 GO:0003924|GO:0005525
Eupl07g00007 720 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 615 719 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00007 Eupl-Chr7 266277 314208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00007 46 82 Eukaryotic Initiation Factors Gene Family AT5G10630 60.526 2.86e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00007 K14416 - nnu:104611010 1031.55