Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl07g00005 ATGGAACTGGCGCAGATGCAAAACAGTGGAGAGCTGATGCAGTACTGGGCTACTAGCACAAGAGAGAAGGGGGATTCATGGATACTCGGGATTCATTATGGTATACTACTATACTTGAGAAAAGAATTTCAAATAGGAAATTTTCCCAGAACGGTGGTTCCTGATTTCGACCCCTTCTTTAATGCCATCTCTGGCCTTAATGGCTCGGGAAAATCTAACATCCTGGACTCCATCTGCTTTGTATTGGGAATCACAAACCTGCAACAGGTCCGGGCTTCGAATCTTCAGGAACTAGTTTACAAGCAGGGACAAGCTGGAATAACCAAAGCTACGGTTTCTGTTGTCTTTGACAATTCGGATCGGAATCGAAGTCCATTTGGTTATGAAGATAGTCGAGAAATCACAGTAACCAGACAGATTGTGGTGGGTGGAAGGAACAAATACCTCATCAATGGACGCCTTGCCCGACCAAAGCAAGTCCAAAATCTTTTCCATTCTGTGCAGCTTAATGTCAACAATTCACAATTCCTCATAATGCAAGGGCGCATCACCAAGGTTTTGAACATGAAACCTCCCGAGATCTTATCCATGCTTGAAGAGGCCGCTGGGACAAGAATGTATGAGACAAAGAAGGAGGATGCTTTGAAGACACTTGGGAAGAAGCAGATCAAAGTTGACGAGATAGATAGGCTTCTTGACCAGGAAATACTGCCTGCTTTGGAGAAGCTGAGGAATGAAAAGATGCAGTACATGCAGTGGGCTAATGGTAACACGGAATTGAATCCTCTTAGAAGGTTCTGCATTGCTTATGAATTTGTCCAGGCGGAGAGGATAAGAGATGATGCTGTCAGTGGGGTCGAACAAATAAAAGCCAAGATTGCTGAGATTGACGATGATACAGGAAGAATGCAGATGAAGATTCAGGAAATGGAGACAAACATAACAAACTTGACTGCTGAAAAAGATGCTATCATGGGTGGGGAGGTGAAAACTTTGTCGGATAAAGTGGATGCCATTTCTCTTGATCTTGTGAAGGAAACATCTGTGCTGAAAAATCAAGAGGATTCTCTCAGGGCCGAAAAAAAGAATTCTGAAAAGATTGCTAGAAGTATTGAAGACATTAAAAAATCTATAGAAGAGAGGGACTCAACTGTTAAAAATGCTGAAGATGGAGCATCTGATCTGAAAAAGAGAGTTGAGGATCTATCTAAGAATTTGGAAGAGTATGAAAAAGAATACCAGGGCGTGCTAGCTGGTAAGAGCAGTGGGAATGAGGAGAAGTGTCTTGAAGATCAATTAGGTGAAGCAAAAACTGCGGTTGGCAGTGCTGAAAACAAAAATAAGCCATTGCGAGAAAGAGCTGAAAGAGAAAAAGCAACAGTTAATGTCAAAGCGTGA 1398 0.4242 MELAQMQNSGELMQYWATSTREKGDSWILGIHYGILLYLRKEFQIGNFPRTVVPDFDPFFNAISGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSVVFDNSDRNRSPFGYEDSREITVTRQIVVGGRNKYLINGRLARPKQVQNLFHSVQLNVNNSQFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEDALKTLGKKQIKVDEIDRLLDQEILPALEKLRNEKMQYMQWANGNTELNPLRRFCIAYEFVQAERIRDDAVSGVEQIKAKIAEIDDDTGRMQMKIQEMETNITNLTAEKDAIMGGEVKTLSDKVDAISLDLVKETSVLKNQEDSLRAEKKNSEKIARSIEDIKKSIEERDSTVKNAEDGASDLKKRVEDLSKNLEEYEKEYQGVLAGKSSGNEEKCLEDQLGEAKTAVGSAENKNKPLRERAEREKATVNVKA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl07g00005 465 MobiDBLite consensus disorder prediction 417 465 - -
Eupl07g00005 465 Pfam RecF/RecN/SMC N terminal domain 50 172 IPR003395 -
Eupl07g00005 465 Gene3D - 42 235 IPR027417 -
Eupl07g00005 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 416 IPR027417 -
Eupl07g00005 465 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 50 462 - -
Eupl07g00005 465 CDD ABC_SMC2_euk 50 189 IPR027120 GO:0005524|GO:0016887
Eupl07g00005 465 MobiDBLite consensus disorder prediction 446 465 - -
Eupl07g00005 465 Coils Coil 385 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl07g00005 Eupl-Chr7 214903 216912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl07g00005 60 203 Structural Maintenance of Chromosomes family AT5G15920 22.917 2.71e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl07g00005 K06674 - psom:113310973 663.685