Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01884 ATGCTGAGCAGAGGGTTCAAGGATCAAATTTATGATGTTTACAGATATCTTCCACCAGAGCTTCAGGTTGTTTTGATCTCTGCAACTCTTCCTCATGAAATATTGGAAATAACAAGCAAGTTTATGACAGATCCTGTCAGGATACTTGTGAAGCGTGATGAATTGACGCTGGAGGGAATCAAACAATTCTTTGTTGCTGTTGAAAGAGAAGAGTGGAAGTTTGATACTTTGTGCGATCTCTATGATACCCTTACCATCACCCAAGCTGTTATTTTCTGCAACACAAAGCGAAAGGTTCCATTGACATGGATATCCAGGTCTGCTGCGTCAGATCTATACGTTACTGCTCCCAGAATCGCTACTGCCGATGGTGGTTGTCAGTCTCAAGCTATCAAGGCCTTTCATCCATGCTAG 414 0.4251 MLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVPLTWISRSAASDLYVTAPRIATADGGCQSQAIKAFHPC* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01884 137 Gene3D - 1 55 IPR027417 -
Eupl06g01884 137 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 48 IPR014001 -
Eupl06g01884 137 Gene3D - 56 107 IPR027417 -
Eupl06g01884 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Eupl06g01884 137 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01884 Eupl-Chr6 46138813 46142736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01884 1 99 Eukaryotic Initiation Factors Gene Family AT3G19760 92.929 1.09e-63 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01884 K13025 - pda:103717373 202.216