Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01883 ATGCAGAGTTCACTTTTCTTATCTTTGCTTTTGCCTCATCAGGTTTCTCTAGTGATCAATTATGACCTTCCAAACAACCGTGAGCTTTACATACATCGGATAGGCCGCTCTGGTCGTTTTGGACGCAAGGGCGTGGCAATTAACTTCGTCCGCAACGATGACATCAGGATTTTGAGAGACATAGAGCAGTACTACAGCACGCAGATTGATGAGATGCCAATGAATGTGGCCGATCTGATATGA 243 0.4486 MQSSLFLSLLLPHQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDIRILRDIEQYYSTQIDEMPMNVADLI* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01883 80 Gene3D - 11 80 IPR027417 -
Eupl06g01883 80 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 13 63 - -
Eupl06g01883 80 Pfam Helicase conserved C-terminal domain 14 41 IPR001650 -
Eupl06g01883 80 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 80 IPR001650 -
Eupl06g01883 80 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 79 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01883 Eupl-Chr6 46127039 46128297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01883 13 80 Eukaryotic Initiation Factors Gene Family AT3G19760 94.118 1.78e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01883 K13025 - ming:122093888 141.739