LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl06g01881	ATGGGTGTTCTGAAGGCCGCGATCGGGGATGCTGTGATAACCTTCATGTGGGTCTTCTGCGTGTCGACGCTAGGGGCCTTCACATCCATCATAGCATCGGCTCTGGGAGTCCAAGGGATGACCACGCTCCTGATCACCACCGTCCTCGTCTCCTTTCTCGTATTCGTATTCAACTTGCTCGGCAACGCCTTGGGTGGGGCCAGCTTTAATCCCACCGGCACTGCCGCCTTCTACGCCGCCGGTGTTGGACCTGACAACCTCATCTCCATGGCCTTCCGTTTCCCTGCTCAGGCAGTTGGGGCAGCGGGCGGTGCCCTGACAATCATGGAAGTGATGCCTCTACAGTACAAACACATGCTCGGAGGACCTTCGTTGAAAGTTGATTTGCACACAGGGGCCATTGCTGAGGGAGTCTTGACCTTCATAATCAGCTTTGCTGTTCTTCTTATAGTCCTCAGGGGCCCGCACAGCCCACTATTGAAGACATGGCTGCTTTCCATGTCAACTGTTGCATTGGTTGTTGCAGGTTCTGCTTATACTGGACCATCCATGAATCCTGCCAATGAAGATTCAAAGTTTGATTGGACCTTTGGTGGGGACTGCCCTCTTTGTGAGGAGTACCTCAGGATGAAATCAAGCTTAATTTCGACAGTTACTCTTATGGCAAAACCTGGGGACATTGGTTATGGAGAGGTTTCGAGTCTGACTAGATGCAGCACTGGTGTTGGACTGTCTGTGCAGGCCTTTGGCTGGGCATATGTAAATAACCGCCACAATACTTGGGAGCAGTTCTATGTTTATTGGATTTGCCCCTTCATTGGAGCGATTCTAGCCGCATGGGTCTTCCGTGTTCTCTTACCTCCTCCAATTAAGCAGAAGAAAGCCTGA	888	0.5158	MGVLKAAIGDAVITFMWVFCVSTLGAFTSIIASALGVQGMTTLLITTVLVSFLVFVFNLLGNALGGASFNPTGTAAFYAAGVGPDNLISMAFRFPAQAVGAAGGALTIMEVMPLQYKHMLGGPSLKVDLHTGAIAEGVLTFIISFAVLLIVLRGPHSPLLKTWLLSMSTVALVVAGSAYTGPSMNPANEDSKFDWTFGGDCPLCEEYLRMKSSLISTVTLMAKPGDIGYGEVSSLTRCSTGVGLSVQAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAWVFRVLLPPPIKQKKA*	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl06g01881	295	Gene3D	Glycerol uptake facilitator protein.	2	294	IPR023271	-
	Eupl06g01881	295	SUPERFAMILY	Aquaporin-like	3	188	IPR023271	-
	Eupl06g01881	295	PANTHER	AQUAPORIN SIP1-1	246	294	IPR044222	GO:0015250
	Eupl06g01881	295	SUPERFAMILY	Aquaporin-like	248	290	IPR023271	-
	Eupl06g01881	295	PRINTS	Major intrinsic protein family signature	5	24	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Eupl06g01881	295	PRINTS	Major intrinsic protein family signature	265	285	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Eupl06g01881	295	PRINTS	Major intrinsic protein family signature	89	108	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Eupl06g01881	295	PRINTS	Major intrinsic protein family signature	50	74	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Eupl06g01881	295	Pfam	Major intrinsic protein	240	282	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl06g01881	Eupl-Chr6	45004903	45012599	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl06g01881	248	283	Major Intrinsic Protein MIP	AT3G04090	61.111	5.09e-10	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl06g01881	K09875		-	twl:119997580	320.472