Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01865 ATGAAGCACTTTTCGAATTCTCCATCTTTATCAGAGATTGCCCTCTTTTTTTGCTATATTTATCTCCTCTGGCTCGTAGACAGGTCGCATCCACAACCTACTACGGATTCATCCGAAGTGAAGGCATTAAAGTCCATTTTACAACAATGGATCAAACCAGGCGGTATGTCGTGGGATATAAGTCGAGAACCATGTAGCGGAGCTTCAATCGACGCAAGCAATATCGAGGACTCGGAATTCCATTCTGGGATTAAATGCAACTGTGCGTACGACAACGGAACTACTTGCCACATAACCCATCTGAGAGTATATGATCTGGATGCAACAGGGATAATTCCAGAGGAGCTCGGGAATTTGACTTATCTCACCTATTTAAAGGTGGATCAAAATTACTTAACAGGTCCCTTGCCTGCATTTATCGGCAATTTATCTGCGTTGCAATTCTTGTCTATTGGTACCAATGCATTATCGGGCCCCATCCCAGAGGAACTTGGACAGCTTCGAAATCTACAAGTACTGGCTTTTGGCTCAAATAATTTCAATGGGTCTCTTCCTCCGCAGCTTGGGAATTTAGTCAATCTCGAGCAGATTTACATGGACAATTCTGGATTAGGTGGAGAGATTCCTTCGACGTTTGCTAACCTACTAAACATGCAAATTATGTGGGCATCGAATAATCCCTTCACGGGCAAGATACCTGACTTCATCGGGAATTGGAGAAACCTTACCACTTTGAGATTTCAAGGGAATGCTTTTGAAGGTCCAATACCATCAAGCTTTTCTAATTTGACTACATTAACTGATCTGCGGATAAGTGACATGTTTAATGTGAGCTCATCGTTGGATTTTATTAAGGACATGAAGGATTTAAGCACCTTGGTTTTGAGAAATAATTTGATTTCCGGAAGTATTCCATCGGATATTGGAGAGTACGCAAATCTACAGATGATAGATGTGTCATACAATGAACTATCAGGAAGTTTTCCTTCTTGGGTGACCCATCAAAATTTAACCTTGAACTTGGTGGCCAACAACTTTATAAATGATAATTCGAATAACAGTGTTTTAGATTCAGGATTGAATTGTCTTCAACGAAATTTTCCATGCAATAGGGATTCTCCGCGATATTCCTCTTTTGCAATAAAGTGTGGTGGCTCAGAGAAGACATCATCTAGTGGAATACTTTTTGAGAGCGAAAATTTGGATCTAGGCCCAGCATCATATTATGTAACTGATACAAGAAGATGGGCAGTTAGCAACATCGGATTGTTTGGATCACTAAGATACTACGGCCTAGGCCTTGAGAATGGAATCTACAATGTAAATCTGCAATTTGCAGAGATACGTTATGCTAACGAAAGCTCACGCACTTGGCAGAGTCTTGGAAGGCGTGTTTTTGATATTTATCTACAGGGGAATCTGCAGTTAAAGGACTTTGATATAAGAAAGGAGGCAGGTGGGTTATCATTTAGAGCTGTTACGAAGGATTTCAAGGTTCAGGTGTCTGCAAACTTCCTTGAAATTCACCTCTTTTGGGCTGGAAAGGGAACATGTTGCATACCTGTACAAGGTTATTATGGACCATCAATTTCAGCCATTAGTGTTACTCCAGACTTCATCCCAACTGTTAGTGACCTTCCCCCAACCACTTCACCAAAGAAAAAGACCAGCTTGATTGTTGGTATTGCAATTGTTGTTGGGGTTGTTAGCATTATATCTATTTTCGTAGTTTATTATTTGAGAAAAAGGAAAAGGGCAGACAACAATGACGAAAAAGTGCTTCTAGAAATAGGTTCCAAGGCAAACACTTTCAGTTATGCTGAACTGAGAACTGCTACAGAAGACTTCAGTCTTGCAAATAAGCTAGGAGAGGGGGGTTTTGGACCTGTTTACAAGGGCATGCTTCTTGATGGAAGAGAAATAGGTGTGAAGAAACTCTCAATAGCATCTAACCAAGGAAAGAGTCAGTTTGTAACAGAGATTGCCACCATTTCTGCAGTGCAACATTGCAACCTTGTGAAATTGTATGGATGTTGCATCAAAGGAGATAATCGACTCCTGGTTTATGAGTATCTCGAAAATAAGAGCCTTGATCAGGCACTTTTCGGAAAGAGTGGTTTACATCTTGATTGGCCAACCCGCTATGATATATGCTTGGGGGCGGCAAGAGGTCTAGCTTATCTACATGAGGAGTCGAGCCCCAGGGTCATACACAGAGATGTCAAGTCTAGTAATATTCTGCTTGACACTGATCTAAACCCCAAAATTTCAGATTTTGGTTTGGCAAAGTTGTACGATGACAAGAAGACCCATATCAGCACCCGAGTTGCTGGGACAATTGGTTATCTTGCCCCGGAGTATGCGATGCGTGGGCATCTGACAGAAAAGGCTGATGTGTTTGGTTTTGGGGTCGTTGCTTTGGAGATCGTCAGTGGGCGACCAAATTCTGATTTAAGCTTAGATCAAGACAAGATATATCTTCTTGAATGGGCTTGGAATCTACATGGAAGTAATCGGGGATTGGAACTGGTCGATCCAACATTAACTAATTTTGACAAAGAAGAAGTTATTCGAATGATAGGAGTAGCTCTTTTGTGCACTCAGGCATCACCAATGCTGCGTCCACCCATGTCGCGGGTAGTGGCCACACTGACAGGAGACATAGAAGTAAGCACTATTGCATCAAGGCCTAGTTACTTAACAGATTGGCATTACATTGACACAAGCACCAGTGTGAGTGATGGAACTTCAGGATCCTTCCTGTCAAAAGCTACAACTAGCCAGCATGACACAGCAAACGAGTCACCAATTGTTGTCAGTCAGCCAATGCTCCATGAGATTATTGATGAAGGATGGTGA 2859 0.4183 MKHFSNSPSLSEIALFFCYIYLLWLVDRSHPQPTTDSSEVKALKSILQQWIKPGGMSWDISREPCSGASIDASNIEDSEFHSGIKCNCAYDNGTTCHITHLRVYDLDATGIIPEELGNLTYLTYLKVDQNYLTGPLPAFIGNLSALQFLSIGTNALSGPIPEELGQLRNLQVLAFGSNNFNGSLPPQLGNLVNLEQIYMDNSGLGGEIPSTFANLLNMQIMWASNNPFTGKIPDFIGNWRNLTTLRFQGNAFEGPIPSSFSNLTTLTDLRISDMFNVSSSLDFIKDMKDLSTLVLRNNLISGSIPSDIGEYANLQMIDVSYNELSGSFPSWVTHQNLTLNLVANNFINDNSNNSVLDSGLNCLQRNFPCNRDSPRYSSFAIKCGGSEKTSSSGILFESENLDLGPASYYVTDTRRWAVSNIGLFGSLRYYGLGLENGIYNVNLQFAEIRYANESSRTWQSLGRRVFDIYLQGNLQLKDFDIRKEAGGLSFRAVTKDFKVQVSANFLEIHLFWAGKGTCCIPVQGYYGPSISAISVTPDFIPTVSDLPPTTSPKKKTSLIVGIAIVVGVVSIISIFVVYYLRKRKRADNNDEKVLLEIGSKANTFSYAELRTATEDFSLANKLGEGGFGPVYKGMLLDGREIGVKKLSIASNQGKSQFVTEIATISAVQHCNLVKLYGCCIKGDNRLLVYEYLENKSLDQALFGKSGLHLDWPTRYDICLGAARGLAYLHEESSPRVIHRDVKSSNILLDTDLNPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSDLSLDQDKIYLLEWAWNLHGSNRGLELVDPTLTNFDKEEVIRMIGVALLCTQASPMLRPPMSRVVATLTGDIEVSTIASRPSYLTDWHYIDTSTSVSDGTSGSFLSKATTSQHDTANESPIVVSQPMLHEIIDEGW* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01865 952 CDD STKc_IRAK 622 886 - -
Eupl06g01865 952 Gene3D Phosphorylase Kinase; domain 1 577 691 - -
Eupl06g01865 952 FunFam Putative LRR receptor-like serine/threonine-protein kinase 692 896 - -
Eupl06g01865 952 FunFam Os05g0263100 protein 40 276 - -
Eupl06g01865 952 SUPERFAMILY L domain-like 92 348 - -
Eupl06g01865 952 ProSiteProfiles Protein kinase domain profile. 616 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01865 952 SUPERFAMILY Protein kinase-like (PK-like) 596 884 IPR011009 -
Eupl06g01865 952 Gene3D Ribonuclease Inhibitor 36 351 IPR032675 -
Eupl06g01865 952 Gene3D Transferase(Phosphotransferase) domain 1 692 895 - -
Eupl06g01865 952 SMART serkin_6 616 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01865 952 Pfam Malectin domain 378 533 IPR021720 -
Eupl06g01865 952 Pfam Protein kinase domain 618 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01865 952 FunFam Leucine-rich repeat receptor-like protein kinase 585 691 - -
Eupl06g01865 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Eupl06g01865 952 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 915 - -
Eupl06g01865 952 Gene3D - 377 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01865 Eupl-Chr6 42276247 42291983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01865 146 951 Receptor kinase-like Gene Family AT1G56120 55.681 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01865 Pkinase 7.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01865 - - msin:131220903 1056.2