Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01862 ATGTGTAGTTTCTTTTGGCGGAGGATGGAGAATGATCAAGGAGATTTAGCAGACATAGTTCGTGCTAGTAGCGGATGCGGTGGCGGTGGTAGCAACCAGGTAACCGATTGGCAATTTCCTTCCCAACCTGCGAATTTTCCGTCAGGGATCGAAGAACCCACTGATGATTTTGGCGATCCCTTCTCTAATATACGAGATCCTCTTTTGCACGAGCTTGACTTCGCCGGTTCAGGCTTCTTTGAAGACTCGAATTCTCTGAACCTCGTTAAGATGAATGTCGAGGATGATAGTAGCAGTAGCGGTAGTCTTCTTGCTCAGAGGATTTTGGATGAGGAGATGAAGAGGCCTTGCAATATCTTCTCAAGGATGCTTCAGATCTCACCAAATCCAAAGATGCCGATTTCACCCAGCGACATCTCAGCTATTACGGTTTCACCAAGGGGAATTAAAACTTCTTCATTACTTTCTAATGACATGGTTAAGGCTAACAGTTCTACAAGCTGCTCGTCCCAGAACACGGCTGTTCAGATCTCGTCCCCACGTAATCCAGGTATCAAGCGAAGAAAGAGCCAGGCAAAGAAGGTTGTTTGTATTCCAGCACCAGCTGCTGCAAACAGCAGGCCTAGTGGAGAAGTTGTTCCATCTGATCTCTGGGCATGGAGAAAGTATGGACAGAAGCCCATTAAAGGTTCTCCTTATCCAAGGGGCTATTATAGATGCAGCAGCTCTAAAGGTTGCTCAGCAAGGAAACAAGTCGAGCGCAGTCGAACTGATCCCAACATGTTGGTCATCACCTATACCTCCGAACATAACCACCCATGGCCGACACAAAGAAATGCGCTTGCCGGCTCAACAAGATCTCAGCCAATGAAGAATAATGCTGCTTCAAAGAGCTCAACATCCTCTCAGACCCCAAAACCTACAAACATGAAGGAAGAACATAAGGAGAAGAATAAAAATAATGCGTCTATTGTGATTGCTGGTGGGTCAATGACAACTTCTTCTATTAAAGAGGAGATGGGAGAGACAGAGAACACAATAGACATGGGTGATGCTGAATTCAATCAAGGTTTCCATCAGAGTTACAGTTCAGCAAATCCAGACTCGAATCAATCTGACGACTTCTTTGCAGATTTGGGAGAATTGGAACCTGACCCTCTAAGTCTCTTGTTCTCTCAACGATTCACAGGAGAAAAATCAGATGAGGAGAAAGAAAAGAAGGCCTTGGATCCATTTTGTTTATTTGATTGGGCAGGAAACAACTCATACGGAGAAGCTAGGAAGGGTTTATAG 1293 0.4501 MCSFFWRRMENDQGDLADIVRASSGCGGGGSNQVTDWQFPSQPANFPSGIEEPTDDFGDPFSNIRDPLLHELDFAGSGFFEDSNSLNLVKMNVEDDSSSSGSLLAQRILDEEMKRPCNIFSRMLQISPNPKMPISPSDISAITVSPRGIKTSSLLSNDMVKANSSTSCSSQNTAVQISSPRNPGIKRRKSQAKKVVCIPAPAAANSRPSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPMKNNAASKSSTSSQTPKPTNMKEEHKEKNKNNASIVIAGGSMTTSSIKEEMGETENTIDMGDAEFNQGFHQSYSSANPDSNQSDDFFADLGELEPDPLSLLFSQRFTGEKSDEEKEKKALDPFCLFDWAGNNSYGEARKGL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01862 430 MobiDBLite consensus disorder prediction 267 307 - -
Eupl06g01862 430 MobiDBLite consensus disorder prediction 163 191 - -
Eupl06g01862 430 MobiDBLite consensus disorder prediction 267 322 - -
Eupl06g01862 430 MobiDBLite consensus disorder prediction 163 185 - -
Eupl06g01862 430 Pfam WRKY DNA -binding domain 216 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g01862 430 Gene3D WRKY domain 188 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g01862 430 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g01862 430 SUPERFAMILY WRKY DNA-binding domain 212 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl06g01862 430 FunFam probable WRKY transcription factor 14 188 268 - -
Eupl06g01862 430 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl06g01862 430 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 391 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01862 Eupl-Chr6 41762726 41765270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01862 1 423 WRKY Transcription Factor Family AT1G30650 46.014 4.81e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl06g01862 WRKY 2.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01862 - - msin:131248356 604.364