Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01855 ATGGGGACACAATGTGTTCCGACTTGTTTCGTAGAGGAGTCTCCAGGATTCTTGACTCATGGAAGTTTTCTCTCCGAAGTGCCCTATAGCATCAAAAGGGAGCCTGATGCCACTTCTATAATTTTAGGCAGTAATGTTATGGAAGCTATGACTGATCCACAACCAATAAAAATGAATGCTGAGCCTAGCAGTTGTGAGAAAGTTAAGGTTAAACGGTCTCTTCGGCGTAAAAATTGGATCGATTATGGGTTATTTGACATTAGTTCTGAAGAGGAATACGATTGCAGAAAATCCATGAAGGACCACTCTTCAAGACACGCCCAGCAAAAGGATGACGCCATTGAATGCTTAGGCAGTCCCCAATGCCGAAAGATATCTGCTAGCTGGCATCCAAAAGAAGCATGTAGGCCCATCATCAATGAAGCTCCCATATTTTATCCAAATGATGAGGAGTTCAAAGATACACTTGGTTACATTGCAAAGATACGCCAGAAAGCGGAACCATATGGTATATGCCGGATTGTACCTCCTCCTTCTTGGAAGCCACCCTGCCCTTTAAGAGAGAGGAGCATATGGGAGCACGCTAAGTTTGCTACCCGAGTCCAGCAAGTCGACAAGCTTCAAAATAGGGAACCCATGAGAAAGAAATCCAGAAGTCGTATTCACAAAAAGAGGAAACGAAGGAGGCACTCAAGGATGGGAACAAGCCAGAGACATATCAATTTGGAAGATTCTGAAGCCAGTGAGTGTGTTGCATCTGACACGGATGAGAAGTTTGGGTTCCATTCTGGTTCAGATTTCACACTTGAAGAATATCAGAAATATGCCGAAGATTTCAAAGATCGGTATTTTGGAATGAAGGATGCTAATGATAACATAAACTCTTGTGGGGTTGAACCCAACAAGAAGTGGGTGCCCTCAGTAGAGGATGTTGAAGGTGAATATTGGCGGATAGTTGAGAAACCAACAGAAGAGATTGAGGTTTACTATGGAGCTGATTTGGAAACTGGGGTATTTGGGAGTGGATTTCCTAAAGCATCATCCTCGGCAACTGAAAGTGACTCAAATCAGTATGTGATGTCAGGGTGGAACTTAAATAATTTCCCACGCCTGCCGGGTTCTGTACTTGGTTTCGAAAGAGTAGACATCTCGGGGGTTCTAGTGCCATGGCTATATGTTGGGATGTGCTTCTCATCATTTTGTTGGCATGTTGAAGACCACCACCTCTACTCGCTAAACTATTTACATTGGGGTGATCCAAAACTATGGTATGGAGTCCCGGGGAATCATGCTTCGGAACTGCAGGACGCCATGAGAAAGCATCTACCGGCTTTGTTTGAAGAACAACCTGATTTACTTCATGAACTGGTCACTCAGCTATCTCCTTCAGTTCTAAGATCTGAGGGCGTGCCTGTTTATCGAGCAGTCCAGCATTCTGGGGAGTTTGTACTCACTTTCCCAAGGGCATACCACTCTGGATTCAATTGTGGATTTAACTGTGCGGAGGCTGTGAACGTCGCCCCATTCGACTGGTTACCACATGGACAAAGCGCTGTGGAGCTCTACAGCGAACAGTGTCGCAAGACATCTGTGTCCCATGACAAGTTGCTCTTTGGGGCAGCTCGGGAAGCCGTCCGGGCCCTCTGGGAGCTCTTAGTACTCAGGAGGGAAAACCCAGGAAATTTAAGTTGGAAAAGTGTTTGTGGGAAGAATGGGGTACTTACTGGGGCAATTAAGACCCGAGTTGGGATGGAGCAGGAAAGAAGAGATTGTCTTCCAATTCTTCTGCATGTTCGAAAGATGGACAGAGACTTCGATATGACCCACGAGAGAGAATGTTTTTCTTGCTTCTATGACTTACATCTATCTGCTGCCGGCTGCAAGTGTTATTCCGACCGATATGCATGTCTTAAACATGCAAAACTTCTCTGTTCATGTGAACCAGGCCAGAGATTTTTTATTTTCCGCTACAATATTGATGAATTGAACACTTTAGTCGAAGCTTTAGAAGGAAAATTAGATGCCATAAGTCGTTGGGCATTGGACGACCTTGGATTGGTTAACACCAATGGCATAGATGCTGGTATCTCTAACTTGGATCAGAAAAATGAGATATCCAGACCCGAGGGTCTCAAGAAGGAAAATCCATTTTGTTCTCAAGGAATTGAAGAAATCCCTGACATTAATGAGCTTTGTAAGTCTGACTGTCATAATGTTTCAAAAGCAGTTCAATCAAGCTGGCAAGGAGGACCATATAGTTTATGTTCATCACATGTCAAGGCAGAAGGGGAGCAAGGGATCTTGAATGAAGAAACTTTGATTATAAAAGATGAAGGTGAAGTGGGGCAGGACCGATGTATCGATTTAAATCTTGAGGATATGTCAGATGAACATGGACTTGGGGTGCAAGAAATATCTGTTCGCTGTAATGATAAGGCCACCATTAATGTGGCTAAGTGTACATCAATGGTTAAGCAAGAGAAAGTTCATAGTTCTGATGTGTTAAGAGAATCTGAGGCTATGGACCTTGACAGTGGTGGTAGGGTCCAATCTGTTACAACCCGCTCAAGTTTCGATTGTGACTCCATGGTTTCTCTAAATCATTCCATTGAGTTAGCTTCTCCTGTTCTTTCCAACGGAAATCACTTGTCGCGTTCGAGGGATACTGAACATCTTTGTATATCTAGTGGGACTAAGCTGTTTGGGGTTGATCTATTGAATCCACATCCATGTTCAGCTGCACCATCAACCAGTACGGTCAAGACTCAGGATGTACAGCCCAGTTCAAGCCTAGAGACTCATCTGAATAGCCAATGCTGTCCGATACAGAAGTTAGATTTGTGTGTCGAGCCTCTAAATTTTGGAGCAGTAGTGCCCAGAAAGCTATGGTGCAGTAAGCTGGCCATATTCCCAAAAGGATTCAGAAGCCGTGTCAGATTCTTTAGTGTCCTTGATCCAACACAATCATGTAGCTATATTTCGGAAGTCCTGGATGCTGGCCTCCTTGGGCCTCTATTTAAGGTTACCATAGAGGACTGCCCGAGTGCAGTTTTCACTAATGTGTCGGCGGGGAAGTGCTGGGAAATGGTGCTAGAGAGACTGAAACAAGAAATCGTAAGACTGCGTAGCCTTGGGAAACAAGGGTTGCCCCCTTCGCAGCCTTTGCAAAGTTTTAATGGGCTTGAATTGTTTGGGTTTTTGTCTCCACCCATTGTTCAGGCTATTGAGGCTCTTGATCCTTATCATCGATGCGTGGAGTACTGGAATCAGAAGCTGAGTTCTACAGGGGAAGATTTGAATACCATCCCTACTCTAGATTTTGCGAGTGCTGCAAATGATAGTGAGCCATACCCTATTGTGTCAACTTGCTCTATTGGGGAAACAAGGACGAAGATTTTTGGTCAGGATTTGACAAAGTGGGACCATGACAAATCAAATATAGGAATTCATCAATCAGTTGATGAGGTAGAGTGTATACTGGGAGGATTGTTCAAGAAGGCAAATCCCAATGAACTGAAGATGATGCAGAGGATATTCTGCAGTGAGTCAGGGAGCACTGATTGGAGATTGGCATTCAGAACTTTGATGGAGGAGATCCAGAAAAAATGTACATAA 3615 0.4415 MGTQCVPTCFVEESPGFLTHGSFLSEVPYSIKREPDATSIILGSNVMEAMTDPQPIKMNAEPSSCEKVKVKRSLRRKNWIDYGLFDISSEEEYDCRKSMKDHSSRHAQQKDDAIECLGSPQCRKISASWHPKEACRPIINEAPIFYPNDEEFKDTLGYIAKIRQKAEPYGICRIVPPPSWKPPCPLRERSIWEHAKFATRVQQVDKLQNREPMRKKSRSRIHKKRKRRRHSRMGTSQRHINLEDSEASECVASDTDEKFGFHSGSDFTLEEYQKYAEDFKDRYFGMKDANDNINSCGVEPNKKWVPSVEDVEGEYWRIVEKPTEEIEVYYGADLETGVFGSGFPKASSSATESDSNQYVMSGWNLNNFPRLPGSVLGFERVDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKLWYGVPGNHASELQDAMRKHLPALFEEQPDLLHELVTQLSPSVLRSEGVPVYRAVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPFDWLPHGQSAVELYSEQCRKTSVSHDKLLFGAAREAVRALWELLVLRRENPGNLSWKSVCGKNGVLTGAIKTRVGMEQERRDCLPILLHVRKMDRDFDMTHERECFSCFYDLHLSAAGCKCYSDRYACLKHAKLLCSCEPGQRFFIFRYNIDELNTLVEALEGKLDAISRWALDDLGLVNTNGIDAGISNLDQKNEISRPEGLKKENPFCSQGIEEIPDINELCKSDCHNVSKAVQSSWQGGPYSLCSSHVKAEGEQGILNEETLIIKDEGEVGQDRCIDLNLEDMSDEHGLGVQEISVRCNDKATINVAKCTSMVKQEKVHSSDVLRESEAMDLDSGGRVQSVTTRSSFDCDSMVSLNHSIELASPVLSNGNHLSRSRDTEHLCISSGTKLFGVDLLNPHPCSAAPSTSTVKTQDVQPSSSLETHLNSQCCPIQKLDLCVEPLNFGAVVPRKLWCSKLAIFPKGFRSRVRFFSVLDPTQSCSYISEVLDAGLLGPLFKVTIEDCPSAVFTNVSAGKCWEMVLERLKQEIVRLRSLGKQGLPPSQPLQSFNGLELFGFLSPPIVQAIEALDPYHRCVEYWNQKLSSTGEDLNTIPTLDFASAANDSEPYPIVSTCSIGETRTKIFGQDLTKWDHDKSNIGIHQSVDEVECILGGLFKKANPNELKMMQRIFCSESGSTDWRLAFRTLMEEIQKKCT* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01855 1204 SMART cupin_9 357 523 IPR003347 -
Eupl06g01855 1204 Pfam C5HC2 zinc finger 613 665 IPR004198 -
Eupl06g01855 1204 PANTHER LYSINE-SPECIFIC DEMETHYLASE 137 977 - -
Eupl06g01855 1204 SMART fyrc_3 1005 1098 IPR003889 GO:0005634
Eupl06g01855 1204 ProSiteProfiles JmjN domain profile. 142 183 IPR003349 -
Eupl06g01855 1204 Pfam F/Y-rich N-terminus 952 996 IPR003888 GO:0005634
Eupl06g01855 1204 SMART JmjN_1 141 182 IPR003349 -
Eupl06g01855 1204 Pfam F/Y rich C-terminus 1003 1090 IPR003889 GO:0005634
Eupl06g01855 1204 MobiDBLite consensus disorder prediction 215 235 - -
Eupl06g01855 1204 ProSiteProfiles FYR domain FYRN motif profile. 941 999 IPR003888 GO:0005634
Eupl06g01855 1204 FunFam Putative lysine-specific demethylase JMJ16 947 1085 - -
Eupl06g01855 1204 Pfam JmjC domain, hydroxylase 390 506 IPR003347 -
Eupl06g01855 1204 SMART fyrn_3 955 999 IPR003888 GO:0005634
Eupl06g01855 1204 ProSiteProfiles JmjC domain profile. 357 523 IPR003347 -
Eupl06g01855 1204 Gene3D Cupin 127 507 - -
Eupl06g01855 1204 SUPERFAMILY Clavaminate synthase-like 263 551 - -
Eupl06g01855 1204 Gene3D - 947 1085 - -
Eupl06g01855 1204 ProSiteProfiles FYR domain FYRC motif profile. 1001 1091 IPR003889 GO:0005634
Eupl06g01855 1204 MobiDBLite consensus disorder prediction 208 237 - -
Eupl06g01855 1204 Pfam jmjN domain 143 176 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01855 Eupl-Chr6 41291331 41310382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01855 98 690 JUMONJI Transcription Factor Family AT1G30810 62.185 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl06g01855 JmjC 2.8e-46 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01855 K11446 - nnu:104598355 1580.46