Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01830 ATGGCTTCTGCTACCGCCTCTGTGGTTCCTGCGAATCGAAATGGACGGCGTAATGGTCCCATGCAAGGAGACGATGATAACTTGGTGTTTGAAACGAGCCCTGGTGTGGAAGTTATCACGACCTTCGATCAGATGGGTATCCGAGATGACCTTCTCCGGGGAATCTATGCTTACGGCTTTGAGAAGCCCTCGGCGATTCAGCAGAGGGCTGTATTGCCAATAATCAAAGGCCGGGATGTTATTGTGCAAGCCCAGTCTGGTACGGGAAAGACCTCCATGATCGCCCTCACTGTTTGTCAGATGGTCGATACCTCCAGCAGAGAGTATGGTCTAAATTCCCTCATTCCTCTTTCACGTAGTACATTTTTAGGGTTTTAA 378 0.4947 MASATASVVPANRNGRRNGPMQGDDDNLVFETSPGVEVITTFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIIKGRDVIVQAQSGTGKTSMIALTVCQMVDTSSREYGLNSLIPLSRSTFLGF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01830 125 Gene3D - 32 119 IPR027417 -
Eupl06g01830 125 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 40 110 - -
Eupl06g01830 125 Pfam DEAD/DEAH box helicase 65 104 IPR011545 GO:0003676|GO:0005524
Eupl06g01830 125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 105 IPR027417 -
Eupl06g01830 125 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
Eupl06g01830 125 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01830 Eupl-Chr6 39131436 39131813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01830 24 108 Eukaryotic Initiation Factors Gene Family AT3G19760 77.647 1.86e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01830 K13025 - nnu:104587558 176.022