Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01810 ATGGCTTCCATCTCTGCAACTTTTCTTCTCTTCTTTTCTCTAAATTTAATCTCCATTTCCCCAATTCCCTCTTCATCAATCATAGAAGATCTCAATAACTTACAGCCACCTCCAGATTTCAACAGCACGGTCTCAAACAACTGTTTCATAAACCCTTCTCTCAGATACTGTAATTACACTTCTACAGACCTCCCTGACATTTTCAAATCCACCATTGTTGCATATCATCTCTGCAACGAATCGAAGAACCCCAATTGCCCTGATTCATTCACGAAGATCGATCTTCGAAACCGCCCGAAAATCACTCCCCTTTACTTGTCCTTCACCTTCTTCTGGAAATACTGTCCCACAACCATCCAAGCAATTGATTTATCCAACAATTCGATCAAGAGCACGTTCCCTTATGAAATTCTTCAGTGCTCACAAATTCAAGCCCTGGATCTGAGCCATAATGAATTCACCGGGGACGTCCCCATACAAAGTTTCTCTCCTCTTACTAACCTTACACTTCTCAATCTCTCTTACAACCATTTCTCTGAAAGTAAAATCTCAAACACCCAGTTTTTTCGACGGTTTAATTCCTCGAGTTTTCTTCACTCAGGCCTAGTCCCAAATCACCATAAATTCAGGATCAAGGCAGTGATCATATTATGTGGTTTTCCAATCTTTGTTGTTCTAATGGTGTGCTGTTCGGGGTGGATCTGTTTCCAGAGGCCAGATTTTTTACCGTCGGTCCTCCGGCGCCAACACAAGTTTACAACGGCTATAGTGAAGGCAGCAACTGACGGATTCTCCAAAAATAATTTGGTGGGGAAGATTGGGAACCTTGAGATATATAGAGGAACATTGAGAGATGGAACTGAAGTTCGAATTGAAATCTACAGAGAGAAGATTTCTAATGAACAACACAGGAAATTTGTCGAAGAATGTAGAATTCTTGTTCAGTTGCACCACAAGAACTTAGTTCGAGTGTTGGGTTGGTGTGGCAATCGGGGATTAAGAGCCATTGTAACAGAATGGACAGATGGAGAGAACATTGAGATGTGGCTATTGCGCTCCCCATCATGGAAGCAACGGCTGAAAGTTACGATGAGAGTTATGGAAGGAATGTGTTATCTCCAGGAGCAATGGCCTGAAGTTGATTATGACATCAGGACAAGTAGCGTGTTGTTGTCGGAGGGTCGAGAGCCATTGATTTCAAGGTTCAAGGTTGGAGATAAGAACAGTACTAGTTCAAAGAAGGTTTACATGTTTGGAGTGTTTCTGCTGGAGATGATAGCAAACAGGCAGCCCCACAAAGAGTTCAAAAGCGGTGAGGCAGGTTTTATCGAGTGGATCAGGTCGCATTACCCTGGAAACGTGTGGAAGGTGATGGATGAGAGTATGAAGAAGAGTGGAATTACGTACGAGCAAGCTACACAAGGAATAGGCCTAGCGTTGATATGCACAGATCTCTCAACTGATCACCAGCCAAGCTTGGTTCAGATATCTGACATGGTTGCTAGAGTCTATGAGTCTTCTCTAGTTTCAGCCTCTCCCAACCATAAGAAATCGCACCAACAAAGAGATGGACACAGACGCATCTGA 1587 0.431 MASISATFLLFFSLNLISISPIPSSSIIEDLNNLQPPPDFNSTVSNNCFINPSLRYCNYTSTDLPDIFKSTIVAYHLCNESKNPNCPDSFTKIDLRNRPKITPLYLSFTFFWKYCPTTIQAIDLSNNSIKSTFPYEILQCSQIQALDLSHNEFTGDVPIQSFSPLTNLTLLNLSYNHFSESKISNTQFFRRFNSSSFLHSGLVPNHHKFRIKAVIILCGFPIFVVLMVCCSGWICFQRPDFLPSVLRRQHKFTTAIVKAATDGFSKNNLVGKIGNLEIYRGTLRDGTEVRIEIYREKISNEQHRKFVEECRILVQLHHKNLVRVLGWCGNRGLRAIVTEWTDGENIEMWLLRSPSWKQRLKVTMRVMEGMCYLQEQWPEVDYDIRTSSVLLSEGREPLISRFKVGDKNSTSSKKVYMFGVFLLEMIANRQPHKEFKSGEAGFIEWIRSHYPGNVWKVMDESMKKSGITYEQATQGIGLALICTDLSTDHQPSLVQISDMVARVYESSLVSASPNHKKSHQQRDGHRRI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01810 528 Pfam Protein tyrosine and serine/threonine kinase 277 400 IPR001245 GO:0004672|GO:0006468
Eupl06g01810 528 SUPERFAMILY Protein kinase-like (PK-like) 241 500 IPR011009 -
Eupl06g01810 528 Gene3D Transferase(Phosphotransferase) domain 1 405 503 - -
Eupl06g01810 528 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 117 500 - -
Eupl06g01810 528 Gene3D Ribonuclease Inhibitor 4 193 IPR032675 -
Eupl06g01810 528 Gene3D Phosphorylase Kinase; domain 1 242 340 - -
Eupl06g01810 528 ProSiteProfiles Protein kinase domain profile. 264 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01810 528 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Eupl06g01810 528 SMART tyrkin_6 267 476 IPR020635 GO:0004713|GO:0006468
Eupl06g01810 528 SUPERFAMILY L domain-like 88 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01810 Eupl-Chr6 38236513 38238880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01810 99 450 Receptor kinase-like Gene Family AT2G23950 24.324 2.56e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl06g01810 PK_Tyr_Ser-Thr 1.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01810 - - ming:122060179 723.005