Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01792 ATGCTTCAGAGCTTACTCCCTCGGTCCCCAATAAATGCTAACTCTAACCCTAGCTCCGATTCCGCCATGAAAACCAAACGCGTTGATCGTGAATCCTTCTCCGGTGACTCCGCCAGAGACGAATACGATCAAGCGCACAAAAAAGCGAATTCTAGCCGTAATTCAGTTGGTGAAGCCACGGTTTCTGGCGAAAAGCCAACCGAACAAGAAGACAAACCGGAAGAAGAAATCATCACGGGAGGTGAATCAGCCGGTCTACGCCTCTTAGGGCTTCTGCTACAGTGCGCCGAGGCAGTTGCCATGGACAACCTCGAAGGAGCAAGCGATCTCCTCCCTGAGATCTCCGAACTCTCCTCCCCATTCGGTTCTTCACCTGAGCGCGTTGCTGCGTATTTCGCAGAAGCTCTACAAGCTCGGATTATCAGTTCTTATCTCGGTACGTATTCTCCCCTCAATCTCAAAACAGTAGCCCTTGCTCAAAATCAACGGATCTGCAAGACTCTCCAGTCTTACAATTCGATCAGCCCGTTGATCAAATTCTCCCATTTCACTGCAAATCAAGCCATCTTCCAAGCACTAGAAGGCGAAGATCGGGTCCATGTGATAGACCTCGATATAATGCAAGGGCTTCAATGGCCTGGATTGTTTCACATCCTCGCTTCGAGATCGAAGAAGATCCGTTCGATGCGAATTACAGGCGTTGGATCATCGATCGAGTTGCTTGAAGCCACCGGCCGCCGACTCTCCGATTTCGCTAATTCACTCGGTCTGCCTTTCGAGTTTCAACCCTTAGAAGGCAAAATTGGGAATATAACCGATTTGAGTCAACTCGCCCCGAGGCAACAAGAAGCTACGGTGGTGCATTGGATGCACCACTGTCTATACGACATCACTGGTTCTGATCTTGGGACGTTGAGATTGCTTAAAATTTTGAAGCCCAAATTGATCACAGTCGTTGAACAGGATCTGAGCCACGCTGGGAATTTCCTAGGGAGATTCGTCGAGGCGTTGCATTATTACTCAGCGCTGTTCGATGCGTTGGGTGATGGATTAGGTGGGGACAGCTTGGAACGGCATCAAGTGGAGCAGCAGTTGTTTGGGTGTGAAATCAAGAACATCGTGGCCGTTGGTGGGCCAAAGAGAACTGGGGAGATAAAAGTGGAGAAATGGGGAGACGAGTTAAGGAGAATCGGGTTTAGACCGGTTTCACTCAGTGGTAACCCGGCGGCTCAGGCGAGTTTATTACTCGGAATGTTCCCTTGGAAAGGGTACACTTTAGTGGAAGAATGTGGGTTTTTGAAGTTAGGGTGGAAAGATCTCTCTTTGCTCACTGCCTCAGCTTGGCAACCGTCGGATTCCGATTGA 1365 0.4952 MLQSLLPRSPINANSNPSSDSAMKTKRVDRESFSGDSARDEYDQAHKKANSSRNSVGEATVSGEKPTEQEDKPEEEIITGGESAGLRLLGLLLQCAEAVAMDNLEGASDLLPEISELSSPFGSSPERVAAYFAEALQARIISSYLGTYSPLNLKTVALAQNQRICKTLQSYNSISPLIKFSHFTANQAIFQALEGEDRVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGVGSSIELLEATGRRLSDFANSLGLPFEFQPLEGKIGNITDLSQLAPRQQEATVVHWMHHCLYDITGSDLGTLRLLKILKPKLITVVEQDLSHAGNFLGRFVEALHYYSALFDALGDGLGGDSLERHQVEQQLFGCEIKNIVAVGGPKRTGEIKVEKWGDELRRIGFRPVSLSGNPAAQASLLLGMFPWKGYTLVEECGFLKLGWKDLSLLTASAWQPSDSD* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01792 454 Pfam GRAS domain family 90 449 IPR005202 -
Eupl06g01792 454 ProSiteProfiles GRAS family profile. 79 449 IPR005202 -
Eupl06g01792 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 65 444 IPR005202 -
Eupl06g01792 454 MobiDBLite consensus disorder prediction 1 22 - -
Eupl06g01792 454 MobiDBLite consensus disorder prediction 1 75 - -
Eupl06g01792 454 MobiDBLite consensus disorder prediction 23 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01792 Eupl-Chr6 37410781 37412739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01792 62 452 GRAS Transcription Factor Family AT5G41920 67.337 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl06g01792 GRAS 2.1e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01792 - - nnu:104610998 721.85