Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01735 ATGGAAGCTACCAACGGTTGGCTCTCCTTTCCCACATATGAGAGTCTCAACCAAGATATGGCTATCAGAAAGTTCTGTACAGCTAGGTTGGAGCAAGAACAAGGAGGAGACTGGGAGGAGGCACTAAATGAGATAGAACAGTGGTCTCTGTCTGATACTACTTGTACTCCTTGCCTAGGTGCTGTCGACGAGGACGAATTCGTCGATAGCTTTATTAATATGGATTGCTATAATGAAGATGATGGCGAGTCGGGATCGAAGCCTCGATCATGCGAAGGTTTTCGAGATGAGGTCGAAACATTTTCTATGGTGGATGATGTTTATGTTGAGATTCCCATGATTGAAGGAGATGAATTTGATATATGTGGTTCATTTGAAGACTTTGAGATGGCTTCAGAGGTGGTGCCTAGCATAGAGGAAGTGAGTCATGGAGTAGACCAAGGGCTTCACCTGGTGCACTTATTGTTGGCCTGTGCTGAAGCTGTTGGTTGCAGGGACACTCAACTCGCCACTTCAATGCTTAATCAAATTTGGGCCTCAGCTAATCCATGGGGTGATTCGTTGCAACGAGTCTCGTTTTGCTTTGCGATGGGATTGAAGTCTAGATTATCACTTCTACACAATGTGGGTGCAAATGGGGCATTGACTAATTCATCTGTGGATGTACCTTTGAGCAGTAGGGAAGAGAAGATGGAGGCCTTCCACTTCCTCTACCAAACAACTCCTTATATCGCCTTTGGTTTCATGGCTGCAAATGAGGCTATATGTCAAGCAGCCCAAGGTAAGGATTCCTTTCATATCATTGATTTAGGGATGGAAAATACCCTTCAATGGCCTTCTTTGATCAGGACCTTAGCTTCGCGGCCTGAAGGCCCACCAAAGCTTCGAATTACGGGGATCATTGGAGATCCCAACATTTTAGAGCTTGAAGCCAGCATGAAAGCCCTCATTGATGATGCAAGCTTACTAGGCATGCATTTAGAGTTTCGTATGATCGCAGAACCTGCGACACCATCTTTATTAACTAGTGAAAATTTTGACTTGAGAGAAGGAGAATTGTTGTTTGTCAATAGTATCATGCATTTGCACAAGTATGTCAAGGAAAGTAGGGGGTCACTAAAGGCGATTCTTCAAGCTATTAGGAAGCTAAATCCAACGTTGGTAACAGTAGTCGAACAAGACGCGAATCATAACGGGCCATTCTTTCTTGGGAGGTTCCTTGAATCACTTCACTACTACTCCGCCATTTTCGACTCCCTCGAAGCTAGCCTCCCTCGACATAGCCAACAAAGGATGAAGATAGAGAAATTGCACTTTGCAGAGGAAATATGCAACATTGTTGCATACGAGGGTTCAAATAGAGTTGAGAGACATGAAAGAACAGATCAATGGAGACGGCAATTAGGACGAGCCGGATTTCAAGTCGTGGGATTGAAGTCTATCAGCCAGACTAGGATGATGTTATCTGTTTATGGGTGTGATGGATATACTCTAGCTAATGAGAAGGGTTGCCTGCTTCTAGGGTGGAAAGGGAGACCCATAATGTTGGCATCTGCATGGCAAGTGCACAATGTTTCATCATCTTGA 1587 0.4442 MEATNGWLSFPTYESLNQDMAIRKFCTARLEQEQGGDWEEALNEIEQWSLSDTTCTPCLGAVDEDEFVDSFINMDCYNEDDGESGSKPRSCEGFRDEVETFSMVDDVYVEIPMIEGDEFDICGSFEDFEMASEVVPSIEEVSHGVDQGLHLVHLLLACAEAVGCRDTQLATSMLNQIWASANPWGDSLQRVSFCFAMGLKSRLSLLHNVGANGALTNSSVDVPLSSREEKMEAFHFLYQTTPYIAFGFMAANEAICQAAQGKDSFHIIDLGMENTLQWPSLIRTLASRPEGPPKLRITGIIGDPNILELEASMKALIDDASLLGMHLEFRMIAEPATPSLLTSENFDLREGELLFVNSIMHLHKYVKESRGSLKAILQAIRKLNPTLVTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRHSQQRMKIEKLHFAEEICNIVAYEGSNRVERHERTDQWRRQLGRAGFQVVGLKSISQTRMMLSVYGCDGYTLANEKGCLLLGWKGRPIMLASAWQVHNVSSS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01735 528 ProSiteProfiles GRAS family profile. 142 521 IPR005202 -
Eupl06g01735 528 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 117 520 IPR005202 -
Eupl06g01735 528 Pfam GRAS domain family 151 521 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01735 Eupl-Chr6 35692933 35694519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01735 146 525 GRAS Transcription Factor Family AT1G66350 40.519 2.71e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl06g01735 GRAS 3.7e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01735 - - tcc:18594894 781.171