Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01732 ATGAGTCCCATAGGACTTTCTCTAACTCTTCTATGTGCCATTTTGGCTGCTTTCATATCCACACAACACATGATTCCAAACCCACCATGCCTTCAATATTTCATTAATTTAGGGTTCACCACATTCTCATCACCCAGTCTTTCAACACTCATCCCATACAAGACCTATAGCCACCACCATCACCAAACTCACCACCACCACAAGGAGAAAATCAAGTCTATCTGCGACGATTTCCCACCTAACTTCCCCCCTCCAGACACAAACACTACCTCGACTTTTTGCGTTGATGGAAACGGGTGTTGTAATTTTACGACAGTGCAGGCAGCCGTTGATGCGGTTGGAGTTTTCAGCTTGAAAAGAAGCATTATATGGATTAATTCTGGGATTTACTTTGAGAAAGTGATGGTCTCAAGGAGCAAACCAAATATCACATTTCAAGGACAAGGGTTTGAATCGACAGCAATCGTGTGGAATGACACCGCCAACTCTTCGCACGGTACATTTTATAGTGGCTCAGTTCAAGTTTTTGGCGCCAACTTCATCGCTAAGAACATAAGCTTCATGAATGTAGCTCCCTTTCCAAGCCCTGGTGCTGTTGGAGCTCAAGCTGTGGCCATCAGAATTGGAGGAGATCAAGCTGCTTTCTGGGGTTGTGGATTCTTTGGAGCCCAAGATACCCTTCACGACGATAGGGGTCGACATTACTTCAAGGATTGTTTTATCCAAGGATCCGTTGATTTCGTTTTCGGCAATGCAAGGTCGTTTTATGAGAATTGCCAGTTGAGTTCTATAGCCAATCCAGTACCAGTAGGATCGAAGGGCATAAATGGAGCTGTTACAGCACATGGGCGAATTTCCAACGATGAAAACACTGGGTTTGCATTCGTAAACTGCAGTATCGGAGGAACGGGAAGGATATGGCTGGGTCGCGCATGGAGGCCATTCTCTCGTGTTGTTTTTGCTTACACTTCCATGACTGAGATCATCTCATCTGAGGGATGGAATGACTTCAATGACCCTACTAGAGACCAGACCATCTTCTACGGAGAGTATAAGTGCTCAGGTGGAGGAGCAAATACGAGTATGAGAGCACCTTATGCTCAAATACTTAATGACACTCAAGCTTCTCCTTTCCTCAACGTATCTTTCATTGATGGGGATCAATGGTTGCAACCTTACCTCTGA 1185 0.4498 MSPIGLSLTLLCAILAAFISTQHMIPNPPCLQYFINLGFTTFSSPSLSTLIPYKTYSHHHHQTHHHHKEKIKSICDDFPPNFPPPDTNTTSTFCVDGNGCCNFTTVQAAVDAVGVFSLKRSIIWINSGIYFEKVMVSRSKPNITFQGQGFESTAIVWNDTANSSHGTFYSGSVQVFGANFIAKNISFMNVAPFPSPGAVGAQAVAIRIGGDQAAFWGCGFFGAQDTLHDDRGRHYFKDCFIQGSVDFVFGNARSFYENCQLSSIANPVPVGSKGINGAVTAHGRISNDENTGFAFVNCSIGGTGRIWLGRAWRPFSRVVFAYTSMTEIISSEGWNDFNDPTRDQTIFYGEYKCSGGGANTSMRAPYAQILNDTQASPFLNVSFIDGDQWLQPYL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01732 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 81 391 - -
Eupl06g01732 394 Pfam Pectinesterase 95 387 IPR000070 GO:0030599|GO:0042545
Eupl06g01732 394 FunFam Pectinesterase 87 394 - -
Eupl06g01732 394 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Eupl06g01732 394 Gene3D - 86 393 IPR012334 -
Eupl06g01732 394 SUPERFAMILY Pectin lyase-like 91 393 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01732 Eupl-Chr6 35631960 35634817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01732 68 391 Carbohydrate Esterase AT1G05310 71.296 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01732 - - nnu:104599703 620.542