Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01729 ATGGCGCCGAGTGGCAGAGACCTTCAGCTCACGCCGGTCTACGGGGGCCGGAAAGCTGCAGATGATTCTGCCGACCTCGAAGACGTACGGCTCCTCGATTCTTACGATGAAGAAGAGAGGGAGAAGAATGAGGAGGAGGTTGTTGTGGTGGTAGATGAGCAAGGGATGAGGAGAATTCAGGTGAGAATCACTGGTATGACCTGTGCTGCGTGTTCGAATTCGATCGAGGCGGCGCTTGGTGGAATCGATGGGGTGGTTCGGGCGTCGGTTGCCTTGCTTCAGAACAAAGCGGATGTGGTGTTTGATCCGAAATTAGTGAAGGATGAAGACATCAAGGTTGCAATTGAAGATGCAGGGTTCGATGCTGAGATCCTTCCAGAACCCAATTCTATTCGACCGAAATCACAAGGGACCCTGACGGGACAGTTCAGGATAGGAGGTATGACATGTGCAGCCTGTGTAAACTCTGTTGAAGGTATTTTGAGAAAGCTCCCTGGTGTCAAAAGAGCAGTTGTGGCCTTGGCCACTTCATTGGGAGAGGTCGAATATGAAGCTACAGTCATTAGTAAGGAGGAAATAGTTAATGAAATTGAAGATGCCGGTTTTGAAGCTACTTTTCTACAGAGCAATGATCAGGATAAGATCTTACTATGGGTAGCTGGGATCTCCAGTGAAATGGATTTACAGCTTTTAGAAAGCATACTTGGGAACTTGAAAGGGGTGAGGCAGTTTCGTTTTGACAGGAATCCTGCTGAATTAGAAGTCCTCTATGATCCTGAAGTCATAGGTTCCAGATCCATAGTTGATGGGATTGAAGGAGGCAGCAAGGGGAAATTTAAATTAAATGTCAGGAACCCTTACACAACGACTTCGAATAATAAAGAAGAATCCGCAAACATGTTTCGGCTTTTCACATCCAGTTTGTTTCTCAGTATCCCTGTCTTTCTCATACGGGTTGTTTGTCCCCGCATACCTCTTGTTTACTCTTTACTACTCTGGCGATGTGGCCCCTTCCTAATGGGTGATTGGTTGAAGTGGGCTTTGGTGACCCTTGTTCAATTTGTTGTTGGAAAACGATTCTACATAGCAGCTTTCAGAGCACTGCGGAATGGATCGACAAATATGGATGTTTTGGTTGCACTGGGAACTTCAGCCTCTTACTTCTACTCTGTCTGTGCACTTCTATATGGGGCCTTCACTGGGTTCTGGTCTCCGACATATTTTGAGACTAGTGCCATGCTGATAACATTTGTGCTGTTGGGAAAGTATTTGGAAATTCTTGCAAAGGGAAAGACATCAGATGCCATCAAGAAGTTGGTAGAACTTGCACCAGCAACAGCTATGTTACTTGTCAGAGATGCAGGAGGAAAGCTTATTGAAGAAAAGGAGATAGATGCATTGCTAATTCAGCCAGGTGACACATTAAAAGTTCTTCCTGGTTCAAAGCTTCCTGCTGATGGTGTCGTCATATGGGGTTCAAGTTATGTTGATGAGAGTATGGTAACTGGTGAATCTGCACCTATTTTGAAGGAGGTGAACTCTTTGGTTATCGGAGGGACCATGAATTCACACGGTGCTCTTCACATACAAGCCACCAAAGTGGGGTCTAATACCGTCTTGAACCAGATAATTTGTCTTGTTGAGGCAGCTCAAATGTCGAAAGCTCCTATTCAGAAGTTTGCTGATTTTGTTGCAAGCATTTTTGTCCCTACCGTTGTTGCCATGGCATTGGTGACATTGTTGGGTTGGTATATTTGTGGTGCATTAGGAGCGTACCCAGAAGAATGGCTACCTGACAATGGCAATTATTTTGTTTTCGCCTTAATGTTTTCAATATCGGTTGTGGTGATTGCTTGCCCTTGTGCACTTGGGTTGGCAACACCAACTGCTGTTATGGTGGCAACGGGTGTTGGGGCTAACAATGGGGTCCTTATAAAAGGAGGAGATGCTTTGGAAAGGGCTCAGAAGGTTAAGTATGTGGTGTTCGACAAAACAGGTACCCTCACACAGGGAAGAGCCACAGTTACAACGGCAAAAGTTTTCACAGAAATGGATCGTGGAGACTTTCTCACTTTGGTTGCTTCTGCAGAGGCCAGCAGTGAACATCCACTGGCAAAAGCAGTTGTGGGGTATGCCCGACATTTCCATTTCTTTGATGAGCCTGTTGCCGCCAAGAATGACCAAAGCCACAGCAAAGATTCTAAATTCTCTGGATGGCTTCTTGATGTCTTGGACTTCTCTGCTTTGCCTGGGAGAGGTGTGCAGTGCTATATACACGGGAAAAGAGTTTTGGTCGGTAACCGGAAGTTGTTGACCGAATTTGAAGTTACTATACCAATTGAGGCTGAAAATTTCGTAGTAGAGCTGGAAGAAAATGCAAAAACGGGGATACTTGTGGCTTATAATGACACCCTCATTGGAGTTTTGGGAGTAGCAGATCCTCTAAAGAGAGAAGCTGCTGTTGTTGTAGAAGGACTGATGAAAATGGGGGTCAGACCAGTCATGGTAACAGGGGATAATTGGAGAACAGCACATGCTGTGGCTAAAGAGGTTGGCATTAAAGATGTGAGGGCGGAGGTAATGCCTGCAGGAAAAGCTGATGTAATACGTTCATTTCAGAAAGACGGAAGCATAGTCGCAATGGTGGGTGATGGTATCAACGATTCTCCTGCTCTTGCAGCAGCCGATATAGGAATGGCAATTGGGGCAGGGACTGATGTTGCCATAGAAGCTGCTGATTATGTGTTGATGAGAAACAACCTAGAGGATGTCATAACAGCCATTGATCTCTCAAGGAAGACCTTCTCCCGTATACGTTTGAATTACGTGTTTGCCATGGCATACAATGTAATTGCTATCCCGGTCGCAGCTGGTGCATTCTTCCCGTTGGTAAGGATAACGTTGCCACCTTGGGTTGCCGGTGCATGCATGGCCCTATCATCTGTAAGTGTTGTGTGCTCATCTTTGCTTTTGAGGAGATATAAGAAACCCAGGCTCACAACTATTTTAGAGATAACTGTAGAGTAA 3027 0.4556 MAPSGRDLQLTPVYGGRKAADDSADLEDVRLLDSYDEEEREKNEEEVVVVVDEQGMRRIQVRITGMTCAACSNSIEAALGGIDGVVRASVALLQNKADVVFDPKLVKDEDIKVAIEDAGFDAEILPEPNSIRPKSQGTLTGQFRIGGMTCAACVNSVEGILRKLPGVKRAVVALATSLGEVEYEATVISKEEIVNEIEDAGFEATFLQSNDQDKILLWVAGISSEMDLQLLESILGNLKGVRQFRFDRNPAELEVLYDPEVIGSRSIVDGIEGGSKGKFKLNVRNPYTTTSNNKEESANMFRLFTSSLFLSIPVFLIRVVCPRIPLVYSLLLWRCGPFLMGDWLKWALVTLVQFVVGKRFYIAAFRALRNGSTNMDVLVALGTSASYFYSVCALLYGAFTGFWSPTYFETSAMLITFVLLGKYLEILAKGKTSDAIKKLVELAPATAMLLVRDAGGKLIEEKEIDALLIQPGDTLKVLPGSKLPADGVVIWGSSYVDESMVTGESAPILKEVNSLVIGGTMNSHGALHIQATKVGSNTVLNQIICLVEAAQMSKAPIQKFADFVASIFVPTVVAMALVTLLGWYICGALGAYPEEWLPDNGNYFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKVKYVVFDKTGTLTQGRATVTTAKVFTEMDRGDFLTLVASAEASSEHPLAKAVVGYARHFHFFDEPVAAKNDQSHSKDSKFSGWLLDVLDFSALPGRGVQCYIHGKRVLVGNRKLLTEFEVTIPIEAENFVVELEENAKTGILVAYNDTLIGVLGVADPLKREAAVVVEGLMKMGVRPVMVTGDNWRTAHAVAKEVGIKDVRAEVMPAGKADVIRSFQKDGSIVAMVGDGINDSPALAAADIGMAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVIAIPVAAGAFFPLVRITLPPWVAGACMALSSVSVVCSSLLLRRYKKPRLTTILEITVE* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01729 1008 SUPERFAMILY HMA, heavy metal-associated domain 53 128 IPR036163 GO:0046872
Eupl06g01729 1008 SUPERFAMILY Calcium ATPase, transmembrane domain M 395 970 IPR023298 -
Eupl06g01729 1008 SUPERFAMILY HMA, heavy metal-associated domain 136 211 IPR036163 GO:0046872
Eupl06g01729 1008 ProSiteProfiles Heavy-metal-associated domain profile. 57 123 IPR006121 GO:0046872
Eupl06g01729 1008 CDD P-type_ATPase_Cu-like 302 978 - -
Eupl06g01729 1008 FunFam Copper-exporting P-type ATPase 762 813 - -
Eupl06g01729 1008 SUPERFAMILY HMA, heavy metal-associated domain 210 273 IPR036163 GO:0046872
Eupl06g01729 1008 SUPERFAMILY Calcium ATPase, transduction domain A 461 546 IPR008250 -
Eupl06g01729 1008 CDD HMA 60 123 IPR006121 GO:0046872
Eupl06g01729 1008 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 49 1004 - -
Eupl06g01729 1008 Pfam E1-E2 ATPase 447 640 - -
Eupl06g01729 1008 NCBIfam copper ion binding protein 59 122 IPR006122 GO:0005507
Eupl06g01729 1008 NCBIfam copper ion binding protein 142 204 IPR006122 GO:0005507
Eupl06g01729 1008 SFLD Haloacid Dehalogenase 643 934 - -
Eupl06g01729 1008 FunFam Copper-transporting ATPase RAN1 668 761 - -
Eupl06g01729 1008 Pfam haloacid dehalogenase-like hydrolase 657 896 - -
Eupl06g01729 1008 ProSitePatterns Heavy-metal-associated domain. 63 93 IPR017969 GO:0046872
Eupl06g01729 1008 FunFam Copper-transporting ATPase 1, putative 429 551 - -
Eupl06g01729 1008 ProSitePatterns Heavy-metal-associated domain. 145 174 IPR017969 GO:0046872
Eupl06g01729 1008 SUPERFAMILY HAD-like 660 988 IPR036412 -
Eupl06g01729 1008 Gene3D - 628 939 IPR023214 -
Eupl06g01729 1008 Gene3D - 139 206 - -
Eupl06g01729 1008 Gene3D - 56 127 - -
Eupl06g01729 1008 Pfam Heavy-metal-associated domain 143 203 IPR006121 GO:0046872
Eupl06g01729 1008 Pfam Heavy-metal-associated domain 61 121 IPR006121 GO:0046872
Eupl06g01729 1008 FunFam Copper-exporting P-type ATPase A 137 207 - -
Eupl06g01729 1008 Gene3D - 668 761 IPR023299 GO:0000166
Eupl06g01729 1008 Gene3D - 762 813 IPR023299 GO:0000166
Eupl06g01729 1008 SFLD p-type atpase 643 934 IPR044492 -
Eupl06g01729 1008 Gene3D - 429 551 - -
Eupl06g01729 1008 FunFam Probable copper-transporting ATPase HMA5 788 939 - -
Eupl06g01729 1008 MobiDBLite consensus disorder prediction 1 21 - -
Eupl06g01729 1008 NCBIfam heavy metal translocating P-type ATPase 375 991 IPR027256 GO:0006812|GO:0016020|GO:0019829
Eupl06g01729 1008 PRINTS P-type cation-transporting ATPase superfamily signature 829 839 - -
Eupl06g01729 1008 PRINTS P-type cation-transporting ATPase superfamily signature 661 675 - -
Eupl06g01729 1008 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Eupl06g01729 1008 PRINTS P-type cation-transporting ATPase superfamily signature 807 818 - -
Eupl06g01729 1008 PRINTS P-type cation-transporting ATPase superfamily signature 905 917 - -
Eupl06g01729 1008 PRINTS P-type cation-transporting ATPase superfamily signature 497 511 - -
Eupl06g01729 1008 ProSiteProfiles Heavy-metal-associated domain profile. 139 205 IPR006121 GO:0046872
Eupl06g01729 1008 NCBIfam HAD-IC family P-type ATPase 414 689 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl06g01729 1008 NCBIfam HAD-IC family P-type ATPase 784 967 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl06g01729 1008 ProSitePatterns E1-E2 ATPases phosphorylation site. 663 669 IPR018303 -
Eupl06g01729 1008 CDD HMA 142 205 IPR006121 GO:0046872
Eupl06g01729 1008 FunFam Copper-exporting P-type ATPase A 55 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01729 Eupl-Chr6 35548978 35559918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01729 1 1008 Primary Pumps ATPases AT5G44790 74.136 0.0 1515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01729 K17686 - psom:113295306 1601.65