Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01719 ATGGGAGAAACGTGTGAGGAGTGCAGAGAGTGGAAGAAGCACTTATTCTGGACTTACTTTAATCCCACTAAGGTTCATATTTTTCCAAAGGTTTTGCTTCACGATTTTCATCTACGACTTGCTATTCCAAGGAATGTTGTGAATGCAATAAGAGAAAAACTATCGGAAACAGTTGATCTTAAGGATTCAAGTGGTAACATTTGGAGTGTAGGATTAAGAGAAAGTGGGGATGACTTGTTCTTTGAACAGGGTTGGAAGGAATTCGTTAGAGACCATTCTTTGGAAAAGCATGATATGGTGATCTTCAGATATGATGATGGTGGGGATTCATATTTCCATGTTTTAGTGTACGATCAAAATGGTTGTGAGAAGGAAGGTTCAGATAGTACTGGAGAGAGTGAGACTTCTGTGGAGATTTTGGATTCCCCTCCTATTACTTCACATTTAACTCAGTCGCAGCGGGGACGTAATTTGTCCAAGAAGAAGAAGAAGAAGAAGAAGAAGGATAGAAAGGGTGACACTAATGATAATGATCACCCAGAGACGTCGCAGCAACGGCAATCTTCTCGTCTAACAGAATTAAGAAGCCGCAAACATCCTTCTCCTCTAGTAGAACCAAAGATCAAAGCAGAACCTGATACAGTTGAAGGCCATATCGACACAGGACTATCATATTCTCTGTATTACGTATCGAAAAGACGACCTGTAACTGATGTAGAGAGGCGTAATTGCAAACTTTCAGCCTGTGGAGTTGTATCAACCAAAATTAATTTTATTGCAGTTATGCAGCCTTCCCATGTCTGCAGGAAATTCTTCTTGACAATTCCCCAGGAAGTTGTGAGAGAAACTATGTCCTGGAAAACCAAAGCTGTCATCCTCCGTGTTCCGCCGAGTTCGAAGACATGGATTACCGGTTTCCACTATAGAGCGTATTCTGCTGGGATATATGGGAAATGGGCAGATTTCGTAATGGATAACAACTTGGAAGAAGGGGATGTCTGCTTGTTTGAGTTGTGTGGAGAAGGACAAAGGAGCAGCAATTCCATCACCATGGATGTTTCTATATTTCGGGTGGTCGAAGAAGTCGTCCCCTTGACCAGGGTTAAATTACCTCCTGTCCATGAGGTGAAGAAGCCCATGAAGTTAGGATAA 1152 0.4201 MGETCEECREWKKHLFWTYFNPTKVHIFPKVLLHDFHLRLAIPRNVVNAIREKLSETVDLKDSSGNIWSVGLRESGDDLFFEQGWKEFVRDHSLEKHDMVIFRYDDGGDSYFHVLVYDQNGCEKEGSDSTGESETSVEILDSPPITSHLTQSQRGRNLSKKKKKKKKKDRKGDTNDNDHPETSQQRQSSRLTELRSRKHPSPLVEPKIKAEPDTVEGHIDTGLSYSLYYVSKRRPVTDVERRNCKLSACGVVSTKINFIAVMQPSHVCRKFFLTIPQEVVRETMSWKTKAVILRVPPSSKTWITGFHYRAYSAGIYGKWADFVMDNNLEEGDVCLFELCGEGQRSSNSITMDVSIFRVVEEVVPLTRVKLPPVHEVKKPMKLG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01719 383 Gene3D - 21 122 IPR015300 -
Eupl06g01719 383 CDD B3_DNA 26 118 IPR003340 GO:0003677
Eupl06g01719 383 SMART B3_2 258 359 IPR003340 GO:0003677
Eupl06g01719 383 SMART B3_2 28 120 IPR003340 GO:0003677
Eupl06g01719 383 Pfam B3 DNA binding domain 258 343 IPR003340 GO:0003677
Eupl06g01719 383 Pfam B3 DNA binding domain 36 118 IPR003340 GO:0003677
Eupl06g01719 383 SUPERFAMILY DNA-binding pseudobarrel domain 23 122 IPR015300 -
Eupl06g01719 383 ProSiteProfiles B3 DNA-binding domain profile. 25 120 IPR003340 GO:0003677
Eupl06g01719 383 Gene3D - 236 362 IPR015300 -
Eupl06g01719 383 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 34 361 IPR044837 -
Eupl06g01719 383 MobiDBLite consensus disorder prediction 123 205 - -
Eupl06g01719 383 MobiDBLite consensus disorder prediction 155 169 - -
Eupl06g01719 383 SUPERFAMILY DNA-binding pseudobarrel domain 256 357 IPR015300 -
Eupl06g01719 383 MobiDBLite consensus disorder prediction 132 154 - -
Eupl06g01719 383 CDD B3_DNA 258 357 IPR003340 GO:0003677
Eupl06g01719 383 MobiDBLite consensus disorder prediction 191 205 - -
Eupl06g01719 383 ProSiteProfiles B3 DNA-binding domain profile. 258 359 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01719 Eupl-Chr6 35084797 35089720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01719 1 357 REM Transcription Factor Family AT4G33280 29.592 7.89e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl06g01719 B3 2.4e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01719 - - csin:114264651 235.728