Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01690 ATGGTGTCTTCCAAGGGCAAATCGAATGTAAATCAAAGTCGAGTTGCAGAAGATCGCCGTGCTCTCAAGAACGTTGGTATCAGAGATTTTAAGATCTATTCGGACATGGAGAAGACTAACGTTCGGGGCCGTGAATCCATTGGTGCCGATGGCATCCAAGTTAAAATTGCAACAAAACCACAAATGCCAACGAGGAAATCGTCACTGGTTACAAAAGGAGCAAATCAGACCAATTTAAGTGACTTAAAGGGTTGTGTCAAAAATCAAGAGAAGGGTAAGAGCAAACATGATAGTTCTGTCAAAATAAAGGTTGGAAGAAAAGCATTGGCTGATGTCAGCAATGTTGGGAGCTACTCATTGAGGAATCGAGCAACTGATGGCTCCAAACTCGTGAAGGATAAGAGTGAGAGAAGTAGTTTGTTACGAGGCAAGATTCATAATGCGAATAATCTAAATGGGCCAAGGGTCTCAGTGGGTCGAAGTACTATGGGTGTGAGTGCGTCATCAAGGGTCTCAGTGGGTCGAAGTACAATGGGTGTGAGTGCGTCATCAAGTAAACCTGTGGTGGGCACAATGAGAACAAATCAAAGCCGAGGTGCTCAAGATCCCCACACTTTGCAGAACGTTTGTATTAGCGATTTTAAGGTGTATTCCAATAACCAGAAGTCTAAGGTCCAGGGTCAGATATCTTTTGGTACTGATGGCAGGATGATTGCAAGAAAGCCTCTAATTCCCATGAGGAATTCATTAACAGTTACAAAGAGGGTTAACCAGACTGATTCAAGTGATTTAAAGGGTATTGTGGGAAGTTCAGACAGAGGTACAGGAAATTCTGTTAAAATTAAGCTTGGAAGGAAAGTGGTGTATGATGTAAGCAATGCTAGGAGCTATCTTTGGAGGAACCGAGCAAGTGATGGCTTAATGTCAGTGAAGGGTAAAACTGAGAAAAGTAATTTTTTACAACGCATGTATGTTTCTGGGGTTCCACTTGATAAGAGTACTGTGGATGCAAGTGCATTGTCAAGAAAGCCTCTCAGGCCAATTGGGAGAACTACAGTCACAATCTCCAGGTCTCGACTCACTTCAAAATCCAAGTGTACATCAGGTTTGAAGAAGTCTATATCTGCTGCTGCAACTTCATTGAAGAGGACAGATGAATTATTGACAAAGTCTGTTCCCAAGAATATTGCATTGGATGTTTCACATGAATCCAGTCTAGAAAAACTTCCATCTGATGGCAATAGCTGCCCAAGTAGGAATACAACAGATGTCATTTCTAGGAATAAATGTAGTCGCCGGAGATCTTTTACATCTTCACTAATGGCAAGATCAGAGGTAATAGGGGAATGTGTTGAGGTTATCAAGCAAGATGAGCTACCAAACATTGATGATAACGCTAATCACCTTGAAGTAGCCGAATATGTGGATGACATCTATCAGTATTATTGGGTTATGGAGGCACAAAATCCATCCCTGGCCAACTACATGGTGGTTCAGGCAGACATAACTCCTAAAATGCGGGGAATACTGGTCAACTGGCTAATTGAAGTACACCTCAAATTTGAATTGATGCAAGAAACTCTCTTTCTCATGGTTGAATTATTTGACAGATTTCTCTCAATCATCACGATTAAAAGGAATGAAATGCAGTTGGTTGGTCTTACTTCACTCTTGTTAGCATCAAAATATGAGGACTTTTGGCATCCTAAGGTCAAGGATTTAATTTGCATCTTGGAAGATTCATGTACAAGAGATCAAATGCTTGCAATGGAGAAACTTATTCTTAAGAAGTTGCTGTTCCGTCTGAACGCACCAACTCCCTATGTTTTCATGTTAAGGTTTCTCAAGGCTGCTCAGTCGGATTCAAAGCTTGAACATCTAGCATTCTACCTCATTGAGTTGTGCTTGGTTGAATATGAAGCTTTAAAGTTCAAACCATCCTTGTTATGTGCATCAGCAATCTATGTTGCAAGATGTACCCTGCAAATGACTCCGGCATGGTCCGCATTGCTTTGCAAACATACACACTATGAAGAATCAGAACTCAGGGTCTGTGCTAATCTGATCTTGAGATTCCAGAAAGCTGCTGGTAAAGGACATTTGAAGGTTACTTATGAGAAATTCATGCGCCCTGATCGCAGTTGCGTTGCTGCGATAAAAGCCATGAATAGGCTGCCTCGATGA 2184 0.4148 MVSSKGKSNVNQSRVAEDRRALKNVGIRDFKIYSDMEKTNVRGRESIGADGIQVKIATKPQMPTRKSSLVTKGANQTNLSDLKGCVKNQEKGKSKHDSSVKIKVGRKALADVSNVGSYSLRNRATDGSKLVKDKSERSSLLRGKIHNANNLNGPRVSVGRSTMGVSASSRVSVGRSTMGVSASSSKPVVGTMRTNQSRGAQDPHTLQNVCISDFKVYSNNQKSKVQGQISFGTDGRMIARKPLIPMRNSLTVTKRVNQTDSSDLKGIVGSSDRGTGNSVKIKLGRKVVYDVSNARSYLWRNRASDGLMSVKGKTEKSNFLQRMYVSGVPLDKSTVDASALSRKPLRPIGRTTVTISRSRLTSKSKCTSGLKKSISAAATSLKRTDELLTKSVPKNIALDVSHESSLEKLPSDGNSCPSRNTTDVISRNKCSRRRSFTSSLMARSEVIGECVEVIKQDELPNIDDNANHLEVAEYVDDIYQYYWVMEAQNPSLANYMVVQADITPKMRGILVNWLIEVHLKFELMQETLFLMVELFDRFLSIITIKRNEMQLVGLTSLLLASKYEDFWHPKVKDLICILEDSCTRDQMLAMEKLILKKLLFRLNAPTPYVFMLRFLKAAQSDSKLEHLAFYLIELCLVEYEALKFKPSLLCASAIYVARCTLQMTPAWSALLCKHTHYEESELRVCANLILRFQKAAGKGHLKVTYEKFMRPDRSCVAAIKAMNRLPR* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01690 727 Pfam Cyclin, N-terminal domain 477 603 IPR006671 -
Eupl06g01690 727 Gene3D - 598 725 - -
Eupl06g01690 727 FunFam putative cyclin-B3-1 isoform X3 601 726 - -
Eupl06g01690 727 SUPERFAMILY Cyclin-like 605 723 IPR036915 -
Eupl06g01690 727 SMART Cyclin_C_2 605 722 IPR004367 -
Eupl06g01690 727 Gene3D - 491 597 - -
Eupl06g01690 727 FunFam G2/mitotic-specific cyclin 491 600 - -
Eupl06g01690 727 PANTHER CYCLINS 432 690 IPR039361 -
Eupl06g01690 727 SMART cyclin_7 609 691 IPR013763 -
Eupl06g01690 727 SMART cyclin_7 512 596 IPR013763 -
Eupl06g01690 727 MobiDBLite consensus disorder prediction 146 202 - -
Eupl06g01690 727 Pfam Cyclin, C-terminal domain 605 719 IPR004367 -
Eupl06g01690 727 SUPERFAMILY Cyclin-like 467 603 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01690 Eupl-Chr6 34319888 34343988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01690 14 726 Core Cell Cycle Gene Families AT1G16330 41.193 1.41e-162 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01690 K21777 - nnu:104599721 722.235