Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01673 ATGGGGGCTCCTCGCTCTAGTGTTAGAAAAGGTTCATGGACTGAAGAAGAAGATCTCTTACTCAAAAGATTTGTAGAGAGATATGGTGAAGGGAACTGGAGGCACGTCCCTGCATGCGCAGGGCTCAATCGGTGTCGAAAGAGTTGCAGGTTAAGATGGTTGAACTATCTTCGTCCAAATATTAAGCGTGGTGACTTCTCCGATGATGAGATTGACCTTATAATTAGACTCCAAAAACTACTCGGCAACAGATGGTCTCTAATTGCAGGTAGAATTCCAGGAAGAACAGCCAATGATATCAAGAACTACTGGAACACTCACTTGAGCAAGAAGCTTACATCAGAACACAAGAGCTTACCAAGACTTGCAACGCACCACCCTCTCTCTCACAGTTCCACCAAGAATTCAGAATCGTCGAGAGGAGCCTTAGAGCCATCTCGTATCGACCCAAGACCAGAAGAAGAAGAAGAATCAGGAGAAGAGAGATTGTCCTTTTGGAAGAGTCTTTTGTTGAAGACAGAAGAAATGGAGAGAAATTTGGGAGTTCAAAATGAAGATCCGTTTGTAGGGTTTGAAGACTTGATTCAAGACATATTGAAGCGTGTTGGGTGA 612 0.4379 MGAPRSSVRKGSWTEEEDLLLKRFVERYGEGNWRHVPACAGLNRCRKSCRLRWLNYLRPNIKRGDFSDDEIDLIIRLQKLLGNRWSLIAGRIPGRTANDIKNYWNTHLSKKLTSEHKSLPRLATHHPLSHSSTKNSESSRGALEPSRIDPRPEEEEESGEERLSFWKSLLLKTEEMERNLGVQNEDPFVGFEDLIQDILKRVG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01673 203 SMART sant 9 59 IPR001005 -
Eupl06g01673 203 SMART sant 62 110 IPR001005 -
Eupl06g01673 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Eupl06g01673 203 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Eupl06g01673 203 Gene3D - 65 140 - -
Eupl06g01673 203 FunFam Myb transcription factor 10 62 - -
Eupl06g01673 203 CDD SANT 12 57 IPR001005 -
Eupl06g01673 203 MobiDBLite consensus disorder prediction 124 162 - -
Eupl06g01673 203 MobiDBLite consensus disorder prediction 144 162 - -
Eupl06g01673 203 CDD SANT 66 108 IPR001005 -
Eupl06g01673 203 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Eupl06g01673 203 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 153 - -
Eupl06g01673 203 MobiDBLite consensus disorder prediction 125 142 - -
Eupl06g01673 203 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Eupl06g01673 203 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
Eupl06g01673 203 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Eupl06g01673 203 Gene3D - 10 62 - -
Eupl06g01673 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01673 Eupl-Chr6 33764226 33770778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01673 1 131 MYB Transcription Factor Family AT1G66370 61.940 1.35e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl06g01673 Myb_DNA-binding 8.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01673 - K09422 ming:122085905 234.572