Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01661 ATGGAGAGGAAGTTTGGTTTATCTGTTCTTCTTCTGGTTCTGTTAATGGGTTTTTCATATGGGTTCGTTTCATGCAAGGACGTCCGAGAACGAGTTCATCGTGACTCGGACTCGTTGTCGACTCTAAAAGTTCTTTTGGAGGTGAAGGAATCGTTCGTTGAAGACCCATTAAACGTGTTGGATGACTGGTCTGAAGATAACCCGAGTTTCTGTACTTGGAGAGGAGTTTCATGTGGGTTGAACTCGGTTGACGTGGTGGGTCTCAACCTGTCTGACTCATCACTCGCCGGGTCGATTTCTCCATCACTCGGTCTCTTGCACCACCTGGTTCAGCTCGACCTCTCTTCTAACCTCCTCACAGGCCCCATTCCACCTCATATCTCTAATCTCTCTTCGCTTGTTTCTTTACTTCTCTTTTCTAACCAACTCACTGGTTCGATCCCTACTCAACTCGGATCGCTAACGAGTCTCCGAGTTCTTCGAATCGGTGACAACGGTCTTACTGGTCCAATTCCGAGTTCTTTTGGTCATCTCTCCAACTTGGTCATTCTTGGTTTAGCCTCTTGTAGTCTCAGCGGTCGGATTCCTCCCGAACTCGGACGACTCGGCCGAGTTCAAAATTTGATTCTGCAACAAAATAAACTTGAGGGTCCGATTCCGCCCGAGCTCGGGAACTGCTCGACTCTCGTCGTGTTCACCGCTGCTCTCAATAGTCTCAACGGTTCGATACCGGGAGAATTGGGTCTTCTTAGAAATCTCCAGATTCTGAACCTTGCCAACAATACTCTCTCCGGAGAGATTCCGAGTCAACTCGGTGAATTGAGTCAACTCGTTTATCTAAACTTCATGGGAAATGGACTTGAAGGCCTAATTCCAAAGTCCCTGGCAAAGTTGGGTAGCCTTCAGAATCTCGATTTGTCGATGAACAAGCTCACGGGGGAAATTCCAGAAGAATTCAATAATTTTGGTGAGTTGGTTTTCATGGTTTTGTCGAGCAACAAGCTTTCAGGTGTTCTACCAGGCAATATCTGTTCGAATGAGACCAGTTTACTGGAGCACTTAATGCTGTCTGATAATGGGTTTGTCGGAGAAATTCCGGTAGGCCTCGGAGAATGCCGAGCGCTGAAACAGCTGGATTTGGCTGATAATCAGCTCAATGGATCGATACCGGTCGAATTGTTCGAGCTACTTAATCTAACTGATCTCTTGCTCAACAACAACAGTTTGGTGAGCTCGATTCCTCGATTGATCGGAAACCTTAGCAATCTTCAAACACTGTCTCTGTATCACAACAATTTACATGGTGGTCTGCCTGGAGAGATTGGAAAGCTCGACAAGCTCGAACTTCTCTATCTTTATGAGAATCAGTTATCTGGTGAGATCCCTTTAGAGATTGGTAATTGTTCGAGCTTGCAAATGATTGATTTTTTCGGAAACCAGTTTACTGGAAGCATTCCAATTACAATTGGAAGGCTAAAGGAGTTGAAGTTCATTCATCTCAGACAGAACGATCTCTCGGGCGAAATTCCCGCCACTTTAGGTAACTGCCAGCAACTAACTGTCATGGATTTCGCAGACAATCGTTTATCCGGTGGCATCCCAGCGACGTTCGGATTCCTTGAATCTCTGCAGCTGTTCATGCTTTACAACAATTCACTGGAAGGTAATGTTCCTGACGAACTACGTAATGTTGCGAACTTGACCAGGGTGAATCTCTCTAATAACAGATTGAATGGTAGTATCGATCTGTTGTGTAGTTCGCGTTCTTTTCTTTCGTTCGATCTCACGAACAATAGTTTTGACAATGAGATTCCACCCCAGTTAGGGAATTCACATTCTCTTGAGAGGCTAAGATTGGGAAGCAATCAATTTATTGGGAAAATCCCATTGACATTTGGAGAAATCAGTGAGCTCTCACTCTTAGACCTCTCAAACAATTTACTCACTGGAGCCATACCACCAGAGCTCTCATTGTGCAAGAAACTGACCCATATTGATCTGAATAACAACCTTCTTGCTGGACCGATACCGTCATGGCTCGGAAGCTTGCCTCAGTTGGGGGAGATCAAGCTCTCCTCTAATCTATTTGCTGGGACTCTTCCTCAAGAACTGTTCAATTGCTCCAATCTCCTTGTGCTTTCTCTAGACAACAATTCCCTAAATGGAACCCTCCCTCCTGAAATCGGAGATCTCGAATCAATCAATGTCCTGAATCTTGACCGCAACGGTTTCTCTGGGCCGATTCCTCCTGCAATTGGCAAGTTAAGCAAGCTCTATGAACTTCGGCTCTCCCGAAACAGCTTCGACGGTGAAATTCCTATCGAGCTCGGACAACTCCACAATCTACAAAGTATGTTGGACCTTAGCTACAACAATCTCACTGGTGAAATCCCTCCTTCTCTTGGGATATTATCCAAACTTGAAGTCCTTGATCTATCTCACAATGAGCTTGTTGGTGAAGTCCCTCTACAAGTTAGTGAGATGAGCAGTTTGGGAAAGCTTGACCTCTCTTACAACAGTCTTCAAGGCCAATTGGATAAGCAACTCTCGCACTGGCCAGCTGATGCCTTTGTGGGGAACGTCGGGCTCTGTGGAAGCCCTCTGGACCCTTGCGATGGCTCCAATTCTAACAACCACCATTCTGGTCTAAATGCATCATCAACGGCGGCAATTACAGCCTTCTCAACCGTAGCCGCCTCTGTTCTAATGGTACTTGGGCTTGTACTACTGATCAAACGCAAGCGCGAATCTCTGAGAAGAGCTCGTGAAGTGAACTGTGCTTATTCATCTAGTTCTTCCCAAGTACAGCGGCGACTACTCTTCCAAGGTGGTGCCATAAGGAGAGATTTTAAATGGTCAGACATCATGGAAGCGACCAACAATCTGAGCGACGAGTACGTGATTGGGTCAGGTGGATCTGGAACGATTTACAAGGCAGAGTTACCCACTGGAGAGATAGTAGCAGTTAAGAAGATATTGAGGAAAGACGATCTTCTATTGGATAGAAGCTTTGCTAGGGAAGTTCGGACGCTCGGGAGGATAAGGCACAGGCATCTAGTGAAATTGATGGGGTGCTGTAGTAATAAAGGAGCAGGATCAAATCTGCTGATTTACGATTACATGGAGAATGGGAGTGTATGGGATTGGTTGCACCAGCCATTGGTGAGTGGCAAGAAGAGGAAGAGTCTCGATTGGGAGGTGCGACTGAGAATAGCAGTTGGGTTGATACAGGGCATAGAGTATCTCCACCACGACTGCGTGCCAAGGATAATTCACAGGGACATCAAGTCAAGCAATGTGCTACTCGATTCTGACATGGAAGCACATTTGGGGGATTTCGGGCTAGCAAAGGCTCTTGTCGAGAACCATGACTCGATCCATACAGAGTCAAATTCCTGGTTTGCTGGGTCTTATGGTTACATTGCTCCAGAGTATGCATACTCATTGAAGGCATCGGAGAAGAGCGACGTGTACAGCATGGGGATTGTGTTAATGGAGCTTGTGAGCGGACGGATGCCTACTGATGGAACTTTTGGAGTAGACATAGACATGGTGAGGTGGGTCGAGTCGCATGTCGACATGTCAGGCCCTGCTCGAGACGAGTTAGTGGACCCTGCTTTGAAACCCCTCTTACCTAATGAAGAATCCGCAGTTTTCCAAGTGCTTGATATCGCATTGCAATGCACAAGAACTGCCCCAGCTGAGAGACCGACGTCTCGTCAAGTGTGCGAGCAACTAATTCACATTGCTAACACTAGTAAGGTGGATTCTGAGAAGAAAATGAGTACAGCTCCATATACTTAG 3804 0.4627 MERKFGLSVLLLVLLMGFSYGFVSCKDVRERVHRDSDSLSTLKVLLEVKESFVEDPLNVLDDWSEDNPSFCTWRGVSCGLNSVDVVGLNLSDSSLAGSISPSLGLLHHLVQLDLSSNLLTGPIPPHISNLSSLVSLLLFSNQLTGSIPTQLGSLTSLRVLRIGDNGLTGPIPSSFGHLSNLVILGLASCSLSGRIPPELGRLGRVQNLILQQNKLEGPIPPELGNCSTLVVFTAALNSLNGSIPGELGLLRNLQILNLANNTLSGEIPSQLGELSQLVYLNFMGNGLEGLIPKSLAKLGSLQNLDLSMNKLTGEIPEEFNNFGELVFMVLSSNKLSGVLPGNICSNETSLLEHLMLSDNGFVGEIPVGLGECRALKQLDLADNQLNGSIPVELFELLNLTDLLLNNNSLVSSIPRLIGNLSNLQTLSLYHNNLHGGLPGEIGKLDKLELLYLYENQLSGEIPLEIGNCSSLQMIDFFGNQFTGSIPITIGRLKELKFIHLRQNDLSGEIPATLGNCQQLTVMDFADNRLSGGIPATFGFLESLQLFMLYNNSLEGNVPDELRNVANLTRVNLSNNRLNGSIDLLCSSRSFLSFDLTNNSFDNEIPPQLGNSHSLERLRLGSNQFIGKIPLTFGEISELSLLDLSNNLLTGAIPPELSLCKKLTHIDLNNNLLAGPIPSWLGSLPQLGEIKLSSNLFAGTLPQELFNCSNLLVLSLDNNSLNGTLPPEIGDLESINVLNLDRNGFSGPIPPAIGKLSKLYELRLSRNSFDGEIPIELGQLHNLQSMLDLSYNNLTGEIPPSLGILSKLEVLDLSHNELVGEVPLQVSEMSSLGKLDLSYNSLQGQLDKQLSHWPADAFVGNVGLCGSPLDPCDGSNSNNHHSGLNASSTAAITAFSTVAASVLMVLGLVLLIKRKRESLRRAREVNCAYSSSSSQVQRRLLFQGGAIRRDFKWSDIMEATNNLSDEYVIGSGGSGTIYKAELPTGEIVAVKKILRKDDLLLDRSFAREVRTLGRIRHRHLVKLMGCCSNKGAGSNLLIYDYMENGSVWDWLHQPLVSGKKRKSLDWEVRLRIAVGLIQGIEYLHHDCVPRIIHRDIKSSNVLLDSDMEAHLGDFGLAKALVENHDSIHTESNSWFAGSYGYIAPEYAYSLKASEKSDVYSMGIVLMELVSGRMPTDGTFGVDIDMVRWVESHVDMSGPARDELVDPALKPLLPNEESAVFQVLDIALQCTRTAPAERPTSRQVCEQLIHIANTSKVDSEKKMSTAPYT* 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01661 1267 Gene3D Ribonuclease Inhibitor 40 199 IPR032675 -
Eupl06g01661 1267 FunFam Leucine-rich repeat receptor-like protein kinase TDR 272 540 - -
Eupl06g01661 1267 Pfam Leucine rich repeat N-terminal domain 43 78 IPR013210 -
Eupl06g01661 1267 SUPERFAMILY Protein kinase-like (PK-like) 947 1246 IPR011009 -
Eupl06g01661 1267 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Eupl06g01661 1267 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 204 271 - -
Eupl06g01661 1267 SUPERFAMILY L domain-like 589 846 - -
Eupl06g01661 1267 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 38 198 - -
Eupl06g01661 1267 Gene3D Ribonuclease Inhibitor 587 880 IPR032675 -
Eupl06g01661 1267 PANTHER LEUCINE RICH REPEAT KINASE 2 488 1252 - -
Eupl06g01661 1267 Gene3D Transferase(Phosphotransferase) domain 1 1041 1265 - -
Eupl06g01661 1267 Gene3D Ribonuclease Inhibitor 439 586 IPR032675 -
Eupl06g01661 1267 FunFam Leucine-rich repeat receptor-like protein kinase 1041 1263 - -
Eupl06g01661 1267 Pfam Protein kinase domain 965 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01661 1267 SMART LRR_sd22_2 444 465 - -
Eupl06g01661 1267 SMART LRR_sd22_2 396 422 - -
Eupl06g01661 1267 SMART LRR_sd22_2 298 321 - -
Eupl06g01661 1267 SMART LRR_sd22_2 804 830 - -
Eupl06g01661 1267 SMART LRR_sd22_2 106 132 - -
Eupl06g01661 1267 Gene3D Phosphorylase Kinase; domain 1 922 1040 - -
Eupl06g01661 1267 Gene3D Ribonuclease Inhibitor 200 275 IPR032675 -
Eupl06g01661 1267 Gene3D Ribonuclease Inhibitor 276 346 IPR032675 -
Eupl06g01661 1267 SMART serkin_6 962 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01661 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672|GO:0006468
Eupl06g01661 1267 SMART LRR_typ_2 250 274 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 298 321 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 683 707 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 106 130 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 492 516 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 708 731 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 154 177 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 396 420 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 564 587 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 635 659 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 804 827 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 828 859 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 755 779 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 444 468 IPR003591 -
Eupl06g01661 1267 SMART LRR_typ_2 178 202 IPR003591 -
Eupl06g01661 1267 Gene3D Ribonuclease Inhibitor 347 438 IPR032675 -
Eupl06g01661 1267 SUPERFAMILY L domain-like 351 630 - -
Eupl06g01661 1267 ProSitePatterns Protein kinases ATP-binding region signature. 968 991 IPR017441 GO:0005524
Eupl06g01661 1267 ProSiteProfiles Protein kinase domain profile. 962 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01661 1267 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 564 875 - -
Eupl06g01661 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 924 1040 - -
Eupl06g01661 1267 SUPERFAMILY L domain-like 40 313 - -
Eupl06g01661 1267 PRINTS Leucine-rich repeat signature 804 817 - -
Eupl06g01661 1267 PRINTS Leucine-rich repeat signature 638 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01661 Eupl-Chr6 33542025 33546636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01661 32 709 Receptor kinase-like Gene Family AT1G17750 35.756 3.72e-96 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl06g01661 Pkinase 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01661 - - ming:122093634 1811.96