Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01645 ATGTGTGCAATGGCACGAATGAGTCTTCCTCCAGGATTCAGATTTCATCCGACAGACGAGGAGCTTGTCGCTTACTATCTTGATCGGAAAATCAGTGGCCAGACCATCGAGCTTGAAATCATCCCAGAGGTTGATCTCTACAAATGTGAGCCTTGGGAGTTACCAGATAAGTCATATTTACCAAGTGAAGATATGGAGTGGTATTTCTTTAGCCCCAGAGATCGAAAATATCCGAATGGCTCGAGAACTAACCGGGCAACCCGAGCTGGTTATTGGAAAGCGACGGGAAAAGATCGGATGGTGCAATCTCAAAAGCGTTCACTCGGCATGAAGAAGACATTGGTTTATTACAGAGGTCGTGCTCCTCACGGCATTCGCACAAATTGGGTAATGCACGAGTATCGCCTAGTCGACTCAGTCTACGACACTGTATCAACTTTAAAGGATGCTTATGCCTTATGTCGCGTATTCAAGAAAACAATCGTTACAACCAAAACTAAAGAGGGAGACGGTGGTTGTTCAGCGAAGGAAACACTATGGTTAGCCGATGACAGGAACGTCAATGACATTGCACAACGTAGAGTAGTAATCGGAGAAGAGAATTACGAGGAAGATTATTCTAAATTTCCATCCGATACTTCCTCGTCGGAGATGACTCAAGGGACACCGATGGATAACGGTATAATAGATGATCTGCGTGTTCCATTTGCGGGCGGAGATGAAGCAAATAGCTCGATGAATGCTAGCCCGAACGTTATGGACTATTCATCTCAGCCAATAGGGGATATAACAATGGCAAACACGACAAGGTTGCAGTATCAGCCTCCTTATCCACCCTTAGCACTAGAAGACTTCCCACATATGGATTCAATGGAGACAAGTTCATCGAATATTCAAACGTTCGAAGAATATATGATGTACGAGAAGTATAGGGGTTACATTACAGAATCAAACATGTTAGAGGAGTTTTTCATTCAAGATTATAACCACTCAAACCACTCAAGATTGAACGAAAGCCAACTACATTTCGAATGA 1035 0.4348 MCAMARMSLPPGFRFHPTDEELVAYYLDRKISGQTIELEIIPEVDLYKCEPWELPDKSYLPSEDMEWYFFSPRDRKYPNGSRTNRATRAGYWKATGKDRMVQSQKRSLGMKKTLVYYRGRAPHGIRTNWVMHEYRLVDSVYDTVSTLKDAYALCRVFKKTIVTTKTKEGDGGCSAKETLWLADDRNVNDIAQRRVVIGEENYEEDYSKFPSDTSSSEMTQGTPMDNGIIDDLRVPFAGGDEANSSMNASPNVMDYSSQPIGDITMANTTRLQYQPPYPPLALEDFPHMDSMETSSSNIQTFEEYMMYEKYRGYITESNMLEEFFIQDYNHSNHSRLNESQLHFE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01645 344 FunFam Nac domain-containing protein 86 18 162 - -
Eupl06g01645 344 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Eupl06g01645 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 262 - -
Eupl06g01645 344 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
Eupl06g01645 344 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Eupl06g01645 344 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01645 Eupl-Chr6 32890099 32893384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01645 4 299 NAC Transcription Factor Family AT1G54330 55.068 1.03e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl06g01645 NAM 3.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01645 - - ming:122092632 422.935