Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01644 ATGGGCCATCACTGTTGTAGCAAACAGAAAGTTAAGAGAGGGTTGTGGTCTCCTGAAGAAGATGAGAAGCTCATCAGATACATCACCACCCATGGCCATGGCTGTTGGAGTTCTGTTCCAAAACATGCAGGACTTCAGAGATGTGGAAAGAGTTGCAGACTTAGATGGATTAACTACTTGAGACCAGACCTCAAGAGGGGTTCTTTTTCTGCACAAGAAGAAAGAGTCATCATTGATGTTCATAGAATTCTTGGCAACAGATGGGCTCAGATAGCCAAGCATCTACCAGGGAGAACAGACAATGAAGTGAAGAACTTTTGGAACTCATGCATTAAGAAAAAGCTTATTGCACAAGGGTTGGACCCAAAAACTCATAATCTGATCCCTAATTCTCATCAGACTACCAATAACAACAATGCATGCAATCCCAATCGATTCTATCAACAACCCACTTCAGTTTTCTCTGTAAATTCACTGATGAGAGATGGATCAATGGACACGATCAACCCACGTTTCATTACATTGCCTCCTCCTCCTCCTCCTCCAAGTACTATTCATCCTCCTCCTCCTCATCCTCCATTGCATGAAGCCATGAGGCCCATGACAGTCCCCACCTTTGACTACCAAAACCCTAATCTTGATTGGACTGATCCTAAAGATCAAAACTCTCATTCTTCGATTGATTTCACTAGTCGATCAATGATAGAGAGTATACCCATCTCATGTTCTTCAATAAATCCATCTGGGTTTGGGTTTTTAGATGAAAATTGCTTGTGGGGTAGTAGTACTGAATCATTTGAACATCCAAGGCAGGAACAAATGCAACCACAGCAACAACAACAACAACAACAGCAGCAACAGGAGAAGGTGTGTGAAGTTGAGTTCGATGAAACCAATGAACTCAAGGATGGTCAGGACATGGAGACTTCTTTCAATAGTTCTAATTTCGATCTTGACTTTATGGATTCTACAATTATGCCTTGTGGACTGTTTTCCAATAATGTGAGCTCCATTGATCATCTTGCATGGGATTGTTAG 1038 0.4181 MGHHCCSKQKVKRGLWSPEEDEKLIRYITTHGHGCWSSVPKHAGLQRCGKSCRLRWINYLRPDLKRGSFSAQEERVIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDPKTHNLIPNSHQTTNNNNACNPNRFYQQPTSVFSVNSLMRDGSMDTINPRFITLPPPPPPPSTIHPPPPHPPLHEAMRPMTVPTFDYQNPNLDWTDPKDQNSHSSIDFTSRSMIESIPISCSSINPSGFGFLDENCLWGSSTESFEHPRQEQMQPQQQQQQQQQQQEKVCEVEFDETNELKDGQDMETSFNSSNFDLDFMDSTIMPCGLFSNNVSSIDHLAWDC* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01644 345 MobiDBLite consensus disorder prediction 265 288 - -
Eupl06g01644 345 CDD SANT 68 108 IPR001005 -
Eupl06g01644 345 SMART sant 12 62 IPR001005 -
Eupl06g01644 345 SMART sant 65 113 IPR001005 -
Eupl06g01644 345 FunFam MYB transcription factor 5 65 - -
Eupl06g01644 345 PANTHER MYB DOMAIN PROTEIN 55 1 294 - -
Eupl06g01644 345 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Eupl06g01644 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Eupl06g01644 345 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Eupl06g01644 345 Gene3D - 10 66 - -
Eupl06g01644 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Eupl06g01644 345 FunFam Transcription factor MYB86 67 142 - -
Eupl06g01644 345 CDD SANT 16 60 IPR001005 -
Eupl06g01644 345 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Eupl06g01644 345 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Eupl06g01644 345 Gene3D - 68 115 - -
Eupl06g01644 345 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01644 Eupl-Chr6 32867335 32868695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01644 1 133 MYB Transcription Factor Family AT3G12720 84.962 2.40e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl06g01644 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01644 K09422 - nnu:104599779 461.84