Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl06g01595 | ATGGCTTCTTCGCGAATCGAAATGGCTTCTTCACCTTACAGTAATGTTCTGAGGGATCACAATCAGAGAGTGAGACATAGAGACAGAGAAAGAGGAAGCAATTCCCGAGCCCAGGCAGCTTTCCAGAAGAATCTCAAAGAGTTGGTGAGAGATAACCTCCACACCTGCATTGTCCTCTCTGCCCCAAGAGATACTGATGCTGTTGTTGATGAGAATTCTCAACATCGGATCGAAAATCGGGATTGTTGGACCAGCGATGAAGAGAGGAATGGTCGCAATTTTCGATCAACGAGTAGTAGGGAAGAGACCATGGTCGAGTCTTCGGCCATGAGGAGGAGACACACACGGATACTTGATCGGTGGGCGGCTCGTCAAGCCCGGGAAATGATAACCACCATTGAGAGGCAAACCCATGAGGCTGAAATCTTGGTACTGTCGAATTCGCAACCGGTTTCGACAAGGTCGCCGACGTTTCTGAGAGAGAATTCCCCTGCTCCATCAGATTCTTCTGCTGATCTTCCTAATATGCGAGCTTCTTCCCTTGTTCAAATGTGGAGGGAATTTGAGGCAGAAGCAAGATTGCCAACAAGGAATCAGTCTGGCAGTGTGAATTCTAATTCAGCAATGAGCAATATTGATACTGCTTCTGTTGAAGAACATTCTGTAGGATCAGAAGTTTGTGACTCTGTTGATGAGAGACATGAGGCTCTGGCAATTCCTGAGGACTCATTCCCATATTGGGAGTCTGATCAGACGGCTCCAAGCAATCCACTCCCATCATATGTGGGAGACAACGAGAGGGTTAGAGTGGCAGATATCATAAGAAGGTTGTATTCAGGGAATGGGAGGCAGAGTGTGATGACCTCTTGGAGCGATGAAATTGATAGGGAGCAGCCCATTGTGATTGATCAATCCCAATCAGAACAAGGGGAACAAAGAGATTTTCCATTTATTGGAAATCCTCCTCGGGTCAGGGGGCGACAAGCAATTATGGATTTGCTAATGCAAATGGAGCGTGAGAGGCAAAGGGAACTCAGCAGACTGGTAGAGCGTCGTGCAGTATCTCAATTCTCGCAGCGAGGTCGTATTCAGTCATTGCTCAGGCTCAGATTCCTACAACGCGAAGTTGCAATTCAAAATCAACGGCGTCCAGCTTCAACAGCATCAGAATTGGACGAATTACAGCAACGAACTACCATCTTTTTCCTAAGGGAGAGATTTAACCAAAGAGTCGAACGGGATGTTAGAGCAGTCCTGAGTGGGGAAGATAACTTGAGAAGATCTCATACACAGTTACCAAATAACACCTTAGATTCAGAACATTCTGGTTTGTCTGATCAGCTCATGAGTGAAGACATACATCATGAAGAGGTTGATACAAATGAGCAGGAGAACACGTCTTACGTAAACCACTCAGTGCCATCTACAAGTGGAGATCTACAAGAAGAAGCCAGACAAATTTCAGATGTTACACAGCAAGAGACAAGTTTAGTGGTTAGCAATCTCGACTGGCAAGGACATGTGGACACTGCAACAACCTCGCAAAGTTGGGAAGTGGATGTAGCAACAGAAGAACCAGACCCCGATACACCGCAGCATGTAGAATCTGTTGATGGTTGGGAAGGGGTTACAGTAACAGAAGAACCAGACCATGTTACCGGGCAGCTTGTAGGATCCAATGATGGAACCTGGCTAAGTGACGTTTCTCATCCACAGAGAGATTGGGAAAGTCACAGGCAAGCATGGTACCATGATATACTTGAGAATAATTCAGACAATGTGGAAATTCGCGAGCTTCTTGAAAGAAGAAGTGTATCAACTTCCCTTGCCAGTGGCTTCAGAGGGAGAATGGAACAATTGATCTTTTCTTACTTACAAAGACAACGGCATCAAGCAGTTGGCGAGAGTGCCGAAGAAGAAGTAGAGAACCCCATTGAGCATCAATATCACGAAGTGAGCGATGATTCTGATCAAATGGCACCTACATCATTGCAACTACCTCTACCACCTCGGTTGAGATCACGTAATCGGTATCAAAACCACGAAGTCAGTGATGAATTTGATCAAGTTGCATCTACATCATTGCAACTGCCTCCACCATCTCAATCTTACTACCAAGACAACCAGCAACGTTCTCCATTCATAAATCATTCTTCACTTGAAATGGAGCTCATATATGATTTGAGAGGACATATGGAACAGCTTCATCAAGAGATGTCCGAGCTGCGAGAATCAATAGCGAGCTGCATGGACATGCAAGTGAAGTTGCAGCACTCCATTAAGCAAGAGGTTTCAGCTGCTGTATGCCATTCTGTTCGAGGAGGGGAAGTGAAGGAGTTCTCCAGTGGGGGACCAATGAGGAAAGGCAGTTGTTGTATTTGCTACGAAATGCAAATCGACTCGCTTTTGTACAGATGTGGGCACATGTGCACCTGTTTCAAGTGTGCCCATGAGTTGCAGTGGAGTAGCGGGAGATGTCCGATATGTCGAGCTCCAATTGTGGATGTCGTGCGAACATACTCCGACTCCTAA | 2532 | 0.4597 | MASSRIEMASSPYSNVLRDHNQRVRHRDRERGSNSRAQAAFQKNLKELVRDNLHTCIVLSAPRDTDAVVDENSQHRIENRDCWTSDEERNGRNFRSTSSREETMVESSAMRRRHTRILDRWAARQAREMITTIERQTHEAEILVLSNSQPVSTRSPTFLRENSPAPSDSSADLPNMRASSLVQMWREFEAEARLPTRNQSGSVNSNSAMSNIDTASVEEHSVGSEVCDSVDERHEALAIPEDSFPYWESDQTAPSNPLPSYVGDNERVRVADIIRRLYSGNGRQSVMTSWSDEIDREQPIVIDQSQSEQGEQRDFPFIGNPPRVRGRQAIMDLLMQMERERQRELSRLVERRAVSQFSQRGRIQSLLRLRFLQREVAIQNQRRPASTASELDELQQRTTIFFLRERFNQRVERDVRAVLSGEDNLRRSHTQLPNNTLDSEHSGLSDQLMSEDIHHEEVDTNEQENTSYVNHSVPSTSGDLQEEARQISDVTQQETSLVVSNLDWQGHVDTATTSQSWEVDVATEEPDPDTPQHVESVDGWEGVTVTEEPDHVTGQLVGSNDGTWLSDVSHPQRDWESHRQAWYHDILENNSDNVEIRELLERRSVSTSLASGFRGRMEQLIFSYLQRQRHQAVGESAEEEVENPIEHQYHEVSDDSDQMAPTSLQLPLPPRLRSRNRYQNHEVSDEFDQVASTSLQLPPPSQSYYQDNQQRSPFINHSSLEMELIYDLRGHMEQLHQEMSELRESIASCMDMQVKLQHSIKQEVSAAVCHSVRGGEVKEFSSGGPMRKGSCCICYEMQIDSLLYRCGHMCTCFKCAHELQWSSGRCPICRAPIVDVVRTYSDS* | 844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 457 | 489 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 426 | 444 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Eupl06g01595 | 843 | ProSiteProfiles | Zinc finger RING-type profile. | 791 | 830 | IPR001841 | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 463 | 489 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 19 | 34 | - | - | |
Eupl06g01595 | 843 | PANTHER | BNAC05G24000D PROTEIN | 1 | 843 | - | - | |
Eupl06g01595 | 843 | SUPERFAMILY | RING/U-box | 790 | 837 | - | - | |
Eupl06g01595 | 843 | Coils | Coil | 732 | 752 | - | - | |
Eupl06g01595 | 843 | Pfam | Zinc finger, C3HC4 type (RING finger) | 788 | 835 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 151 | 174 | - | - | |
Eupl06g01595 | 843 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 777 | 841 | IPR013083 | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 86 | 111 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 651 | 671 | - | - | |
Eupl06g01595 | 843 | MobiDBLite | consensus disorder prediction | 426 | 445 | - | - | |
Eupl06g01595 | 843 | CDD | mRING-HC-C3HC5_NEU1 | 788 | 840 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl06g01595 | Eupl-Chr6 | 31620528 | 31624868 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl06g01595 | 791 | 837 | C3H Transcription Factor Family | AT3G06140 | 42.553 | 1.54e-06 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl06g01595 | - | - | nnu:104599793 | 783.867 |