Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01579 ATGAATACAAGGGAGATAGTTCGCAGAGAGAGGCAGAGATCGATGGCTGCAAAATCTGGGTTTTTGATGAGCAACATTCCATCAGAAAAGGCACCATGCGAACCTAAAAAACTGGATACAATTGCCAAAAGTAGTTTTGTTTCAATTAGCAACCCAGTCTATGAAACCGAAGATATGGAACCAATTGGCAAAGTCAATATGAATTCAACTAGTAACCCGCCTTATGAACTCAAAAGAATGGATCCAATCGCCAAAAGTAGTTTCAATTCAACCAGTAACTCACCATGTGAACTCAAAAGAATGGATCCAATTGCCAGAAATAGTTTGAATTCAACTAGTTACCCAACAGGTGAACACAAAAAAATGGATCCAATTGCCAAAAGTAGTATGCATTCAACTAGTTGCCCACCAGGTGAACACAAAAGAATGGATCCACTTGCCAAAAGTAGTATGGATACAATTGATAACCTACCCAGTGAGCACAAAAAAATGGATCCAATTGCAAAAACTAGTATGAGTTCAACTGGTAACCCATCAAGTGAGCACAAAAAAATGGATCCAATTGTAAAAACTAGTATGAGTTCAACTGGTAACCCATCAAGTGAGCACAAAAAAATGGATCCAATTGCCAAAAGTAGTTACTCAAGTAGTAACCCATGCTCAAGGATGCTTACAAATTCAGAAACAACAACAGCGACAACGACAACACCTACAGCAGCACCGACAACAACAAGCGCAAAGACAAGTGATGTAAAGATCAGCGACTCTACCAACAGCCATGGCCGAGGGAGCTGCATTAGTGACAGCTTAGAGAGCTCCAGTGCACCTCTGAAACCTCACACTGGTGGTGATGATCGGTGGGAAGCCATTCAACTGACCAATTCCAGAGATTCCCCTCTTGGCCTCGGCCACTTCCGACTCCTCAAGCGCATTGGTTATGGTGACATTGGAAGCGTCTATCTTGTTGAACTCAGAGGAACTAAAACCTTCTTTGCCATGAAAGTGATGGACAAGGCCTCAATTGCTAGTAGAAATAAGCTATTCCGAGCACAGACAGAAAGGGAGATTCTTGGTCTTCTTGATCACCCCTTCTTGCCCACTCTGTATTCTCATTTTGAGACAGATAAGTTCTATTGCTTGGTCATGGAGTTCTGCAGTGGGGGTAATCTCCATTCTCTTCGGCAGAAGCAGCCAAACAAGTATTTCAGTGAGCAAGCTGCACGGTTTTATGCTTCAGAGATATTACTGGCGCTCGAGTATCTCCACATGCTCGGAATCGTGTACAGGGATCTGAAGCCAGAAAATGTGCTAGTAAGGGAGGAGGGCCATATCATGCTCTCGGACTTTGACCTATCACTACGCTGCTCTGTCAGCCCGACACTTGTCAAGTCATCGTCTGTCCATGTTAGCACTGGTAGTGACATACTCAACAATGAGTATATGGTGCATGGGTGTATCCAGCCATCATCGTTTTTCCCACGGATCCTACCTAAGAAGAACCGCAAATCTAAATCCGATTTCGGTCTCTTTGCTGGTGGGTCCCTCCCTGAGCTGATGGCAGAGCCCACAAGCGCACGTTCGATGTCTTTTGTTGGGACCCACGAGTACCTGGCCCCAGAGATTATACGTGGAGAGGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGCATATTCCTGTACGAATTGTTGCTTGGGACAACCCCTTTCAAAGGCTCAGGCAACCGCGCCACACTCTTTAATGTGGTTGGCCAGCAGCTGAAGTTCCCAGAGGTGCCGGCTGTGAGCCATGTAGCACGGGATCTCATCCGTGGCCTCCTGGTGAAGGACCCACAAAAGCGGATTGCCTACCGAAGAGGTGCCACAGAGATAAAACAACATCCATTCTTCGAGGGTGTGAACTGGGCTCTAGTGCGGAGCACCATGCCACCCCTTGTACCAGAGCCTGTAGACTTTGGGCAATTTACTTGTAAGGAGGCAGTTCATATTGAGAAGAAGGTAGCAGAAAATGGTGGTGGTGAAAATAAGAGCAGTTCTCATGATTCTTCTTACCTTGATTTCGAGTATTTTTAG 2073 0.4554 MNTREIVRRERQRSMAAKSGFLMSNIPSEKAPCEPKKLDTIAKSSFVSISNPVYETEDMEPIGKVNMNSTSNPPYELKRMDPIAKSSFNSTSNSPCELKRMDPIARNSLNSTSYPTGEHKKMDPIAKSSMHSTSCPPGEHKRMDPLAKSSMDTIDNLPSEHKKMDPIAKTSMSSTGNPSSEHKKMDPIVKTSMSSTGNPSSEHKKMDPIAKSSYSSSNPCSRMLTNSETTTATTTTPTAAPTTTSAKTSDVKISDSTNSHGRGSCISDSLESSSAPLKPHTGGDDRWEAIQLTNSRDSPLGLGHFRLLKRIGYGDIGSVYLVELRGTKTFFAMKVMDKASIASRNKLFRAQTEREILGLLDHPFLPTLYSHFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFSEQAARFYASEILLALEYLHMLGIVYRDLKPENVLVREEGHIMLSDFDLSLRCSVSPTLVKSSSVHVSTGSDILNNEYMVHGCIQPSSFFPRILPKKNRKSKSDFGLFAGGSLPELMAEPTSARSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLLGTTPFKGSGNRATLFNVVGQQLKFPEVPAVSHVARDLIRGLLVKDPQKRIAYRRGATEIKQHPFFEGVNWALVRSTMPPLVPEPVDFGQFTCKEAVHIEKKVAENGGGENKSSSHDSSYLDFEYF* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01579 690 FunFam Serine/threonine-protein kinase AGC1-7 523 648 - -
Eupl06g01579 690 MobiDBLite consensus disorder prediction 210 276 - -
Eupl06g01579 690 ProSiteProfiles Protein kinase domain profile. 305 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01579 690 FunFam Serine/threonine-protein kinase AGC1-5 303 388 - -
Eupl06g01579 690 Gene3D Phosphorylase Kinase; domain 1 303 388 - -
Eupl06g01579 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Eupl06g01579 690 PANTHER FLIPPASE KINASE 1-RELATED 159 654 - -
Eupl06g01579 690 Gene3D Transferase(Phosphotransferase) domain 1 506 648 - -
Eupl06g01579 690 SUPERFAMILY Protein kinase-like (PK-like) 292 651 IPR011009 -
Eupl06g01579 690 Gene3D Transferase(Phosphotransferase) domain 1 389 458 - -
Eupl06g01579 690 MobiDBLite consensus disorder prediction 158 284 - -
Eupl06g01579 690 MobiDBLite consensus disorder prediction 107 145 - -
Eupl06g01579 690 Pfam Protein kinase domain 306 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01579 690 SMART serkin_6 305 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01579 690 MobiDBLite consensus disorder prediction 668 690 - -
Eupl06g01579 690 CDD STKc_phototropin_like 304 653 - -
Eupl06g01579 690 FunFam serine/threonine-protein kinase D6PK-like 389 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01579 Eupl-Chr6 31157593 31170493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01579 272 690 AGC Kinase Gene Family AT1G79250 71.973 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl06g01579 Pkinase 4.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01579 - - ming:122058921 806.979