Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01549 ATGGACGCAGCTCAACCTTCTGATACCGTGATGGCGGAGGCGGCGGTGCCGTCCCCTGACCCGACTCCGCCGGCCGGGGTGTCTCAACCAGGAATCGAGGGTATTCCTGCGATTCTGAGTCACGGTGGACGATTCATACAATACAACATATTCGGCAATATATTCGAGGTCACTGCCAAATATAAGCCTCCAATCATGCCCATCGGCAAGGGCGCTTACGGTATCGTATGTTCGGCTTTGAATTCCGAGACGAACGAGCAAGTGGCTGTTAAGAAGATTGCCAACGCCTTCGATAACAAAATCGATGCTAAAAGGACTCTTCGTGAGATAAAGCTTCTCCGCCACATGGATCATGAAAACGTTGTGGCAATCAGAGACATAATACCACCACCTGAGCGGGGGGCATTTAATGATGTTTATATTGCATATGAGCTGATGGACACTGACCTTCATCAGATAATTCGTTCCAATCAAGTATTATCAGAGGAGCACTGTCAGTATTTCCTATATCAGATCCTCCGTGGATTGAAATACATACATTCTGCAAATGTTCTACACAGGGATTTAAAGCCTAGCAATCTTCTCTTGAATGCCAATTGTGATTTAAAGATATGCGATTTTGGACTTGCTCGTGTCACCTCTGAAACTGATTTCATGACAGAGTATGTTGTTACAAGATGGTATCGGGCACCAGAGCTGTTGCTGAACTCATCAGAATATACTGCAGCAATTGACGTATGGTCTGTGGGCTGCATTTTCATGGAACTGATGGACCGGAAACCTTTATTTCCTGGCAGAGATCACGTCCACCAGCTACGTTTACTACTGGAGCTGATTGGCACCCCAACTGAGGCTGACTTGGGGTTTATGAGCGAAAATGCGAGGAGATACATTCGGCAACTTCCATGTCACATTCGGCAGTCATTTACTGAGAAGTTCCCACATGTTCACCCTGCAGCTGTTGATCTTGTTGAAAAGATGTTAACATTTGATCCTAGGCAAAGGATTACAGTTGAAGATGCGTTGGCACATCCTTACCTAACATCCCTGCATGACATCAGTGACGAACCTGTTTGCTCGACTCCCTTCAGTTTTGACTTTGAGCAACATGCACTGTCTGAGGAACAGATGAAGGAGCTGATCTACCGAGAAGCCCTGGCATTTAACCCCGAGTATCAGTAG 1182 0.4636 MDAAQPSDTVMAEAAVPSPDPTPPAGVSQPGIEGIPAILSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEQVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPERGAFNDVYIAYELMDTDLHQIIRSNQVLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSEYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPTEADLGFMSENARRYIRQLPCHIRQSFTEKFPHVHPAAVDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCSTPFSFDFEQHALSEEQMKELIYREALAFNPEYQ* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01549 393 SUPERFAMILY Protein kinase-like (PK-like) 67 355 IPR011009 -
Eupl06g01549 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Eupl06g01549 393 Pfam Protein kinase domain 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01549 393 ProSiteProfiles Protein kinase domain profile. 62 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01549 393 SMART serkin_6 62 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01549 393 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 60 348 - -
Eupl06g01549 393 CDD STKc_TEY_MAPK 55 390 - -
Eupl06g01549 393 ProSitePatterns Protein kinases ATP-binding region signature. 68 92 IPR017441 GO:0005524
Eupl06g01549 393 Gene3D Transferase(Phosphotransferase) domain 1 146 374 - -
Eupl06g01549 393 Gene3D Phosphorylase Kinase; domain 1 45 384 - -
Eupl06g01549 393 FunFam Mitogen-activated protein kinase 47 156 - -
Eupl06g01549 393 FunFam Mitogen-activated protein kinase 146 374 - -
Eupl06g01549 393 MobiDBLite consensus disorder prediction 1 30 - -
Eupl06g01549 393 ProSitePatterns MAP kinase signature. 97 200 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01549 Eupl-Chr6 30116055 30157614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01549 3 393 MAP Kinase Gene Family AT2G43790 85.787 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Eupl06g01549 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01549 K14512 - nnu:104589867 745.347