Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01545 ATGGTGGAGAGAAGGAAGCCTCTGATACTTTCTTCGACAAGATGCCTTCTCGATTCTGTACTGAATTCAACGCCAAAAACAAAGGACGGAGATGGAGGAGAGAAAATTCAGCTTTCTGGGCACAGTAGTAATTTGAAGTCTTTGGGGTTACCAGCAGGGATTCTCCATTGCTCGAAGGGTCGAACAGACGTTCCAGACCCGAAGGAGGCTTCTCTTGATGATTCCGCCTTGGTCGGGCTTTCTGCATCGGTTCTGAAAAGACTATCCATAACATCTGGTTCACTGGTGCTTGCCAGGAATGTTGGGACAAGGTCTCAGAGAATTGGTAGGGTTGTTGTTCTAGATGCACCTGACATTGTGGTCCAACCTGAGATGAACCCACCGTTTTCCCATCCTCCACGTGCAATGGTTGTTTTTCCTTGTTATACATTTCCTCCAAATCATCACCTGCCCTTGGATGTAGCCGCCTATCTCTCGCCTCTTTTAGCATTTAACCTTGACTTGCACATATCATGCCTGAAATCTCTTGTTCATGGGGGACAAGAGACTTTAATGTCTTTGTTTGAATTCAAAAAGGACGAGACGGGTGAGAAGGGGATTGAGGCCTCTGCTGTTGGTGTAGAACTGGCGCCTTGGGCTCATTTGCCAAGATTTGCCTCACACTTAAGGGCTTCTTTTGTGAAGATACCGGAATGTGGTGCCATTGAATCTCTTAAAGGGAGTTCGTCAATTGAAGATGAAGATCGACAAGAAATGATTGATTTGGCGTTGCACAATTACTTTAAAGTTGATAGGTATCTAGCAAAAGGTGACATTTTTTGCATTCACATAGATTGGAATTGCAATTCGGAGATGTGCATTCCTTGCAGCCAAAAGACTTGTGAAAATTCCATTGACAATATAATCTACTTTAAGGTCATTGCTATGGAACCAATAGATGAACCCATTCTTCGTGTCAACTGCAATCAAACTGCACTTGTGCTTGGAGGGAGTGTGCCTTCTGCTGTTCCGCCCGATATATTGATTGGTGATTCGAAAGGGTTCATGCCATTGCAGGGGGACACAGTGAAGCTTTTGGCGTCTGTACTTGCACCACCTCTATGTCCTTCAGCACTTTCTTCAAAATTCAGAGTTGCTGTTCTCTTACACGGTTTGGCAGGGTGTGGGAAGCGGACTGTTGTTAGATATGTTGCTCGTCGCTTGGGTCTTCACGTAGTGGAATATAGTTGTCATGATCTAATGGTTTCCTCTGAAAAAAAGGCTTCTATTGCACTAACTCATGCTTTCAATACAGCTCACAGATACTCTCCAACTATACTACTTCTCCGCCATTTTGAGGTTTTCCGAAATTTATCTTCTCATGAGGGTTCACCTTCTGATCAAGTTGGTGTTACTGCTGAAGTTGCATCTATTATTCGGGAGTTCACTGAGCCAGATTTTGAAGATGAAGATTTTTATTCTGGAGAACAAAGAAATGGTGTTTTTCATGTGAAGGATTCTGAAGGGATAAGCGGGCATCGAGTGCTACTAGTTGCAGTTGCTGACAGTTCCGAAGGTCTACCAGCATCTATTAGCCGTTGCTTCAGTCATGAAATAAGTATGGGCCCTTTGAATGAAGAGCAGAGGGTTGAAATGCTGTCCCAGTCACTGCGAAGTGTTTCTGAAGTCCCCAGTTGCATTGGTTCGGTGGACCTTGTAAAGGACATAGTTGGACAGACATCTGGTTTCATGCCTAGGGATATACTTGCTTTAATTGCTGATGCTGGTGCAAACTTAATGCCAAGGCTCACTGATCAAATTGATAATTTTGAGCCCAAAGACTCTGATGAGAACAGTTCTGTTAAGTTTAACCTGGTCCAGGATAATAATGTACACACGCATGCAAGTCACAATCTGGGTAAAGAAGACATAGCCAAAGCTTTGGAAAGATCAAAGAAAAGAAATGCATCTGCATTGGGTACTCCAAAGGTGCCTAATGTCAAATGGGAGGATGTTGGTGGACTTGAGGATGTGAAGAAATCGATTCTGGATACCGTCCAGTTGCCTCTCCTGCATAAGGATTTATTCTCATCTGGATTGCGTAAGCGTTCGGGTGTGCTTCTCTATGGTCCTCCTGGAACAGGGAAGACTTTATTAGCAAAGGCAGTTGCAACAGAGTGTTCCTTGAATTTTCTCAGCGTAAAGGGGCCTGAATTGATCAATATGTACATAGGGGAATCAGAAAAAAATGTTCGAGACATTTTCCAGAAGGCTAGATCTGCGCGTCCTTGTGTTATTTTTTTTGATGAACTCGATTCTCTTGCTCCTGCTCGGGGAGCCTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGACGGCCTAAATGATTCTACACAGGATTTGTTCATTATAGGGGCAAGCAACAGACCTGATCTTATTGATCCAGCACTTCTACGGCCTGGCCGGTTTGATAAGCTGCTATATGTTGGAGTTAACTCTGATACATCTTACAGAGAGCATGTCCTGGCTGCCCTTACACGGAAGTTTAAACTGGATGAGAATGTATCTCTATACTCCGTGGCGAAGAAATGCCCCCCAACTTTTACTGGCGCAGATATGTATGCCTTGTGTGCAGATGCTTGGTTTCATGCTGCAAAGCGCAAGGTTTCAAGTCCTCATTCAGCTTCTTCCGGCAGAGATGACCAAGCTGATTCTGTTATTGTTGAATTTGAAGATTTTATGAAGGTTCTAGGAGAACTATCTCCCTCTTTGTCAGTAGCCGAGCTGAGGAAGTACGAATTGCTGCGAGATCAATTTGAAGGACCTTCAAAGTGA 2838 0.4408 MVERRKPLILSSTRCLLDSVLNSTPKTKDGDGGEKIQLSGHSSNLKSLGLPAGILHCSKGRTDVPDPKEASLDDSALVGLSASVLKRLSITSGSLVLARNVGTRSQRIGRVVVLDAPDIVVQPEMNPPFSHPPRAMVVFPCYTFPPNHHLPLDVAAYLSPLLAFNLDLHISCLKSLVHGGQETLMSLFEFKKDETGEKGIEASAVGVELAPWAHLPRFASHLRASFVKIPECGAIESLKGSSSIEDEDRQEMIDLALHNYFKVDRYLAKGDIFCIHIDWNCNSEMCIPCSQKTCENSIDNIIYFKVIAMEPIDEPILRVNCNQTALVLGGSVPSAVPPDILIGDSKGFMPLQGDTVKLLASVLAPPLCPSALSSKFRVAVLLHGLAGCGKRTVVRYVARRLGLHVVEYSCHDLMVSSEKKASIALTHAFNTAHRYSPTILLLRHFEVFRNLSSHEGSPSDQVGVTAEVASIIREFTEPDFEDEDFYSGEQRNGVFHVKDSEGISGHRVLLVAVADSSEGLPASISRCFSHEISMGPLNEEQRVEMLSQSLRSVSEVPSCIGSVDLVKDIVGQTSGFMPRDILALIADAGANLMPRLTDQIDNFEPKDSDENSSVKFNLVQDNNVHTHASHNLGKEDIAKALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDTSYREHVLAALTRKFKLDENVSLYSVAKKCPPTFTGADMYALCADAWFHAAKRKVSSPHSASSGRDDQADSVIVEFEDFMKVLGELSPSLSVAELRKYELLRDQFEGPSK* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01545 945 FunFam Peroxisomal biogenesis factor 6 657 846 - -
Eupl06g01545 945 FunFam Peroxisome biogenesis protein 6 349 535 - -
Eupl06g01545 945 SMART AAA_5 376 538 IPR003593 GO:0016887
Eupl06g01545 945 SMART AAA_5 695 835 IPR003593 GO:0016887
Eupl06g01545 945 ProSitePatterns AAA-protein family signature. 802 820 IPR003960 GO:0005524|GO:0016887
Eupl06g01545 945 PANTHER AAA-FAMILY ATPASE 73 942 - -
Eupl06g01545 945 Gene3D - 350 558 IPR027417 -
Eupl06g01545 945 Pfam ATPase family associated with various cellular activities (AAA) 699 831 IPR003959 GO:0005524|GO:0016887
Eupl06g01545 945 Pfam ATPase family associated with various cellular activities (AAA) 380 532 IPR003959 GO:0005524|GO:0016887
Eupl06g01545 945 CDD RecA-like_PEX6_r2 671 830 IPR047533 -
Eupl06g01545 945 Gene3D - 833 919 - -
Eupl06g01545 945 FunFam Peroxisome biogenesis protein 6 833 919 - -
Eupl06g01545 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 601 IPR027417 -
Eupl06g01545 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 658 939 IPR027417 -
Eupl06g01545 945 Gene3D - 657 934 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01545 Eupl-Chr6 29815259 29890043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01545 605 898 Calmodulin-binding Proteins AT3G56690 35.690 4.72e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01545 K13339 - nnu:104592173 1339.32