Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01542 ATGTCGAAAACTCCATGGTTTTCTTTGTTTGCCCTCTTTTTCTGCTTTATTTACCTTTTCTGCCTGGTTCAGAGGTCCCAAGCTCAAGCTACTACAGACCCATCTGAAGCGAGGGCTCTAAATGCTATGTTCCAACGTTGGGGAATCAAGGCTTCGGATAAATGGAATATAAGCGGAGAACTATGTAGCGGAGTCGCCACTGATACAACGCATGTTGACAACATAGCCTACAACCCCTTGATTAAATGCGATTGTTCTGCCGACAACGGATCCACTTGCCACATTAGAGAATTGAAAGCAATCTCATTGGACATAGCAGGCGTAATTCCAGAGGAGCTCACGAAATTGACTTTCCTCACCAATCTGAATTTGGGTAAAAATTACTTAACAGGTCCTATACCTGCATTCCTTGGCAATTTAACTCGCATGCTATACATCAACTTTGGCATCAATGCATTGTCAGGGGACCTTCCCAAAGAACTTGGAAACCTTACAAATCTACTCTCCCTGGCTTTTGGTTTTAACAACTTCTCAGGATCACTCCCTTCTGAGCTTGGGAAGTTGGCAAAATTGGAACAACTTTACTTAGAAAGTGCTGGAGTGAGCGGAGAGATTCCTTCATCATTCGCGAACCTAAAAAACTTGAAGACTGTGTGGGCACCAGACAATCAACTCACAGGCAAGATACCTGACTTTATAGGGAATTGGACAAAGCTAACTGCCTTGAGGCTTCAAGGAAACTCATTTGAAGGTCCAATACCTTCTACATTCTCCAATCTAAACTCATTGACTGATCTGCGAATAAGTGACTTATCCAATGGGAGCTCATCATTGGCGTTTATTACTGATATGAAGGCCATTGTGACCTTAATCTTGAGGAATAACAATATTTCTGATACTATTCCATCCAATATTGGGGAGTACGAAAGTTTGCAACAGCTGGATTTGAGCTTCAATAATTTGGCAGGACAACTTCCAAGCTCTCTCTTCATTTTGAGTTCACTCACTTACTTGTTTCTTGGAAATAATCAATTATCTGGTGCCTTGCCTTCCCAAAAAGGCGCATTACTTCGCAATATAGATTTGTCATACAATGGATTGTCAGGAAGCTTTCCTTCTTGGGTTACTGAACAAGATTTACAGCTGAACTTGGTGGCCAATAACTTCACGATTGATAGTTCAAACAGCAGTGCTTTGCCTTCAGGATTGAATTGCCTTCAACGGAACTTTCCGTGCAACCGCGGTTCTCCACGCTATTCTTCCTTTGCAATTAGGTGTGGTGGTCCAGAGATTACATCTTCTAATGGGACTGTGTTTGAGAGGGACAATGCCACTCTTGGCCCGGCTTCATATTTTGTGACCGACACAAACAGGTGGGCAGTTAGCAATGTTGGAAGGTTTGTCGACAGCAGCAATGCTGAGTATACCCGAACTGAGCTAACCAAGTATGCAAATACATTAGACTCGGAGCTGTTCCAAACAGCAAGACTATCCCCAGGATCCCTAAGATACTATGGCCTGGGACTTGAGAATGGAAACTACACTGTGAACCTGCAATTTGCAGAGACAGCTTACCAAGATTCTCCTACTTGGCAGAGTCGCGGAAGGCGTCTTTTTGATATTTATCTTCAGGGGAAACTGGAATTAAGAGACTTTGACATACGAAAGGAAGCAGGTGGGACCTCTTTTACAGCTGTTCAGAAGGAACTTAAGGCTCAGGTATCCGAAAACTTCCTTGAAATCCATCTTTTTTGGGCTGGAAAAGGGACTTGCTGCATACCTGCTCAAGGTACATATGGACCTTCCATTTCTTCTATCAGCGTTACTCCAGATTTCATTCCCACTGTTAGTAACATGCCACCAACCACTTCTACAAAGAAGAAAAGGACTGGTCTGGTTGTGGGGATCACTGTTGTTCTTGGAGTCGTAAGCTTTATATTTGTTTTTGTGGTCTTTTGTTTAATTCGAAGAAGAAAAAGTCGGGGCACTGACAAAGATGAAGAACTTCTTGGAATAACTGCTAGACCACACACTTTCAGTTATGATGAACTAAGGACTGCTACAAATGACTTCAATCCTACTCATAAGCTAGGAGAGGGAGGATTCGGACCCGTTTATAAGGGAATACTTTCTGATGGAAGGAATGTGGCTGTGAAGCAACTCTCAGTAAAATCCCACCAAGGGAAGAGTCAGTTTGTTACAGAGATTGCTATCATATCCGCTGTACAACACCGTAACCTTGTGAAATTGTATGGATGTTGTATCGAGGGTGATAAGCGAATGTTGGTTTATGAGTATCTCACACACAAGAGCCTCGATCAAGCACTCTTTGGAAAGAGTGGTTTGCATCTTAATTGGTCAACTCGCTACAACATATGCTTGGGAACAGCAAGAGGTCTAGCTTATCTTCATGAGGAGTCAAGGCTCCGAATTGTTCACAGAGATGTCAAGGCTAGTAATATTCTACTTGACGCCGATCTCAATCCAAAAATTTCAGATTTCGGTTTAGCCAAGCTGTATGACGACAAGAAGACCCACATGAGTACTCGGGTTGCAGGAACAATTGGTTATCTAGCACCAGAGTATGCCATGCGTGGGCACCTAACAGAAAAGGCTGATGTGTTTGCATTTGGGGTTGTCGCTCTCGAGGTCCTCTGTGGGAGGCCAATCAATGACTCGAGCTTGGACGAAGACAAGATGTACCTTCTTGAATGGGCTTGGCATCTGCATGAAAATAATAGTGAATTAGAACTGGTGGACCCAACATTATTGGAATTCAATGAAGAAGAAGCCAAACGATTGATAGGAGTATCACTTTTATGCATTCAAGCATCACCGTTGCTACGACCACCAATGCCACGAGTGGTGGCCATGCTGTCAGGAGATATCGAAGTGTGTGCCGTCACGTCGAAGCCCGGATACTTAACTGATTGGCAGTTTAACGATGTCAGCAGCTTTATGAGCTATGATACTTCGAGAACCTCTATTTCAGGAGCTACTAATAGCCTACAAAGCTCATCATCAATTTCGAACACGGTGGTTGATGCAAACCATTCAATCAACTGA 3066 0.4325 MSKTPWFSLFALFFCFIYLFCLVQRSQAQATTDPSEARALNAMFQRWGIKASDKWNISGELCSGVATDTTHVDNIAYNPLIKCDCSADNGSTCHIRELKAISLDIAGVIPEELTKLTFLTNLNLGKNYLTGPIPAFLGNLTRMLYINFGINALSGDLPKELGNLTNLLSLAFGFNNFSGSLPSELGKLAKLEQLYLESAGVSGEIPSSFANLKNLKTVWAPDNQLTGKIPDFIGNWTKLTALRLQGNSFEGPIPSTFSNLNSLTDLRISDLSNGSSSLAFITDMKAIVTLILRNNNISDTIPSNIGEYESLQQLDLSFNNLAGQLPSSLFILSSLTYLFLGNNQLSGALPSQKGALLRNIDLSYNGLSGSFPSWVTEQDLQLNLVANNFTIDSSNSSALPSGLNCLQRNFPCNRGSPRYSSFAIRCGGPEITSSNGTVFERDNATLGPASYFVTDTNRWAVSNVGRFVDSSNAEYTRTELTKYANTLDSELFQTARLSPGSLRYYGLGLENGNYTVNLQFAETAYQDSPTWQSRGRRLFDIYLQGKLELRDFDIRKEAGGTSFTAVQKELKAQVSENFLEIHLFWAGKGTCCIPAQGTYGPSISSISVTPDFIPTVSNMPPTTSTKKKRTGLVVGITVVLGVVSFIFVFVVFCLIRRRKSRGTDKDEELLGITARPHTFSYDELRTATNDFNPTHKLGEGGFGPVYKGILSDGRNVAVKQLSVKSHQGKSQFVTEIAIISAVQHRNLVKLYGCCIEGDKRMLVYEYLTHKSLDQALFGKSGLHLNWSTRYNICLGTARGLAYLHEESRLRIVHRDVKASNILLDADLNPKISDFGLAKLYDDKKTHMSTRVAGTIGYLAPEYAMRGHLTEKADVFAFGVVALEVLCGRPINDSSLDEDKMYLLEWAWHLHENNSELELVDPTLLEFNEEEAKRLIGVSLLCIQASPLLRPPMPRVVAMLSGDIEVCAVTSKPGYLTDWQFNDVSSFMSYDTSRTSISGATNSLQSSSSISNTVVDANHSIN* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01542 1021 Pfam Malectin domain 421 606 IPR021720 -
Eupl06g01542 1021 FunFam Leucine-rich repeat receptor-like protein kinase 419 610 - -
Eupl06g01542 1021 FunFam Leucine-rich repeat receptor-like protein kinase 660 766 - -
Eupl06g01542 1021 Gene3D Phosphorylase Kinase; domain 1 662 766 - -
Eupl06g01542 1021 Gene3D Transferase(Phosphotransferase) domain 1 767 969 - -
Eupl06g01542 1021 SUPERFAMILY Protein kinase-like (PK-like) 675 990 IPR011009 -
Eupl06g01542 1021 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01542 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase 767 971 - -
Eupl06g01542 1021 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 1002 - -
Eupl06g01542 1021 Gene3D - 421 611 - -
Eupl06g01542 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Eupl06g01542 1021 Gene3D Ribonuclease Inhibitor 265 420 IPR032675 -
Eupl06g01542 1021 Pfam Protein kinase domain 694 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01542 1021 FunFam Leucine-rich repeat transmembrane protein kinase 34 273 - -
Eupl06g01542 1021 CDD STKc_IRAK 697 959 - -
Eupl06g01542 1021 Gene3D Ribonuclease Inhibitor 35 196 IPR032675 -
Eupl06g01542 1021 SUPERFAMILY L domain-like 90 378 - -
Eupl06g01542 1021 FunFam Putative LRR receptor-like serine/threonine-protein kinase 274 397 - -
Eupl06g01542 1021 Gene3D Ribonuclease Inhibitor 197 264 IPR032675 -
Eupl06g01542 1021 SMART serkin_6 691 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01542 Eupl-Chr6 29646198 29661884 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01542 143 997 Receptor kinase-like Gene Family AT1G56120 63.944 0.0 1119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01542 Pkinase 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01542 - - qsu:111995102 1441.02