Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01540 ATGAATGTGCCGGAGATGTCAGAATCGCCGGAGATTTCAAAATCCAACAGGAGACGAGGGTTTCTGGCAAAAACATCCAAGAGGAACTCCAAAAAAAGAAGACCAGTAAGACGAATAGGATGCAATGCACGGATGCTTATTCAATTGGAACGTGATGAAAAATATGTTGTGGTCGAGTTTGAAGAGCAACACAACCACGAGCTTGTACCTCAATCTCAAGTGCATCTACTGAGGTCGCATCGAAATATTGAGAGTGTACAAGCTGATGCAATGGGAAGAAGACATCCAAAGACGATTTTCATAGATCAAGCTCAATCAATGATTTCAAGAGTTGCATTTATGATAATGAGACAGAAGAGGAGTTTTAATCATGTTGGGAAGATCTACTTCAAAAGTATGGGTTGA 405 0.4049 MNVPEMSESPEISKSNRRRGFLAKTSKRNSKKRRPVRRIGCNARMLIQLERDEKYVVVEFEEQHNHELVPQSQVHLLRSHRNIESVQADAMGRRHPKTIFIDQAQSMISRVAFMIMRQKRSFNHVGKIYFKSMG* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01540 134 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 88 - -
Eupl06g01540 134 MobiDBLite consensus disorder prediction 1 37 - -
Eupl06g01540 134 MobiDBLite consensus disorder prediction 20 37 - -
Eupl06g01540 134 Pfam FAR1 DNA-binding domain 18 70 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01540 Eupl-Chr6 29515154 29517687 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl06g01540 FAR1 7.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01540 - - pper:18792489 72.0182