Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01538 ATGAACTCGTCGAATTCTCCATCTTTTTCAACGATCGCCCTCGTTTTTATCTGTATTTATCTCTTCTGGTTCGTAGACAGATCGCATGCTCAAAATACTACGAATGCTACTACGGATCCAACTGAAGTGAAGGCATTAAACTCCATTTTACAACAATGGAACAAATCAGCCGTTGCTTCGTGGAACATAAGTGGAGAACCGTGTAGCGGAGCTGCAATCAACACAACCGGCAGCATCGAGGATCCGGCTTTCAACCCAGGGATTAAATGCGTGTGTACGTACGACAGCGGAACTACGTGCCACATAACCCAACTGAGAGTATATGCTTTGAATGCAGTAGGGGTAATTCCAGAGGAGCTCAGTAATTTGACTTATCTCACCTATTTTAAGGTGGATCAAAATTACTTAACAGGTCCCTTGCCTGCATTTATCGGCAATTTAACTGAGTTGGAAACCTTGTCTGTTGGTATTAATGCATTATCTGGCCCCATCCCAGAAGAGCTTGGACTGCTTCGGAATCTAAAATTACTGGCTATTGGCTCAAATTATTTCACTGGATCTCTTCCTCCGCAACTTGGGAATTTGGTCAATCTCGAGCAGATTTACATGGACAGTTCTGGAGTGGGTGGAGAGATTCCTTTGACGTTTGCTAACCTAGTAAACATGCAACAACTGTGGGCAGCAGATAATCCCTTCACGGGCCAAATACCTGACTTCATCGGGAATTGGACAAAACTTACCGTCTTGAGATTCCAAGGGAATGCTTTTGTAGGTCCAATACCATCCAGCTTTTCTAATTTGACTTCATTAACTGATCTGCGGATAAGTGACTTGTCTAACGTGAGCTCAACATTGGATTTTATTAAGAATATGACGGGTTTAACTAGCTTAGTTTTGAGAAATAATTTGATTTCCGGTGGTATTCCTTCTGATATTGGAGAGTACCAAAATCTACTGAGGCTGGATCTTAGCTTCAATAATTTAACTGGACGAATTCCGAGCTCTCTGTTCAATTTGAGTTCTCTCACATACTTGTTTCTTGGAAACAATAGCTTATCTGGTCCCCTTCCCTCTGAAAAAAGTTCAACACTTATCACTGTAGATCTGTCATACAATGAACTATCGGGAAGTTTTCCTTCTTGGGTAACCCAATCAAATTTTAACTTGAACTTGGTGGCCAACAACTTTACAAATGATAATTCAAGCAACAGTGTTTTGGATTTAGGATTGAATTGTCTTCAGCGAAGTTTTCCCTGCAATAGGGATTCTCCGCGCTATTCCTCCTTCGCAATAAATTGTGGTGGCCTAGAGAAGACATCTTCTAGTGGAATAGTTTTTGAGAGCGATAATTCGACTCTAAGCCCAGCATCATATTATGTAACTGATACAAGAAGATGGGCAGTTAGCAACGTCGGATTGTTTACTGATAATTCTGAGGGTACTACGTACACCCAAAACACCTTATCGCAAATTACAAATACTTTAGACTCAGAGTTGTTCCAGACGGAAAGGCTATCCCCGGGATCACTAAGATACTACGGCCTAGGTCTTGAGAATGGAATCTACAATGTAAATTTGCAATTCTCAGAGATACAGTTCATTGACAATAGCTCGCGCACTTGGCAGAGTCTTGGAAGACGTGTTTTTGATATTTATCTACAGGGGAATAGGGAGTTAAAGGACTTCGATATAAGAAAGGAGGCAGGTGGGGTATCTTTTAGAGCTGTTACGAGGACTTTCAAGGCCCAGGTGTCTGAGAACTTCCTTGAAATTCATCTATTTTGGGCCGGAAAGGGGACATGTTGCATACCTGTACAAGGTTATTATGGACCATCCATTTCAGCCATCAGTGTTACTCCGGACTTCGACCCAACTGTTAGTAACCTTCCCCCAACTACTCCCACAAAGAAAAAGACTGGCTTGATTGTTGGTATTGCAGTTGCTGTTGGAGTTATTAGCTTTATATCTGTTTTTGTAGTTTATTATTTGAGAAAAAGGAAAAGAGCAAGCAGCAATGACGAAGAAGTGCTTCTAGGAATAGATGCCAAGCCAAACACTTTCAGTTATGCCGAACTGAGAACTGCTACAGAAGACTTCAATCCTACAAATAAGCTAGGAGAGGGGGGATTTGGACCTGTTTACAAGGGCATGCTTCCTGATGGAAGAGCAGTGGGTGTGAAGAAACTCTCAGTAGCATCTCACCAAGGAAAGAGTCAGTTTGTAACAGAGATTGCCACCATTTCTGCAGTCCAGCATCGCAACCTCGTGAAATTGTATGGATGCTGCATTGAGGGGGATAATCGACTCTTGGTTTACGAGTATCTCGAAAACAAGAGCCTTGATCAGGCACTTTTTGGAAATAGTGGTTTGCATCTTGATTGGCCAACCCGCTATGAAATATGCTTGGGGACAGCAAGAGGTCTAGCTTATCTTCACGAGGAGTCGAGGCCCAGGATCGTACACAGAGATGTCAAGGCTAGTAATATTCTGCTTGACACCGATCTAAACCCCAAAATTTCAGATTTTGGTTTGGCGAAGCTGTACGATGACAAGAAGACCCACATCAGCACTCGAGTTGCAGGGACAATTGGCTATCTTGCCCCAGAGTATGCTATGCGTGGGCATCTAACAGAAAAGGCTGATGTGTTTGGTTTTGGGGTCGTCACTTTGGAGATCGTATGTGGGCGACCAAATTCTGATTCAAGCTTAGATCAAGAAAAGATATATCTTCTTGAATGGGCCTGGAATCTACATGAAAATAACCGGGTATTGGAACTGGTCGATCCAACATTAACGAACTTTGACGAAGGGGAAGCAATTCGAATGATAAGATTAGCTCTTTTGTGCACTCAAGCATCACCAATGCTACGCCCACCCATGTCGCGGGTAGTGGCCATGCTGTCAGGAGACATGGAAGTGAGCACTGTTACGTCGAGGCCTAGTTACTTAACAGATTGGCAGTACACTGATACAAGCACCATTGTGACTGATGGAACTTCAGGATCCTTCATGTCACAAGGTATTAGTAGCCAGCTTGACACAGCAAACCAGTCGCCAATTGTTGTCACTCAACCAATGCTCCATGAGATTATTGGTGAAGGACGGTGA 3108 0.4299 MNSSNSPSFSTIALVFICIYLFWFVDRSHAQNTTNATTDPTEVKALNSILQQWNKSAVASWNISGEPCSGAAINTTGSIEDPAFNPGIKCVCTYDSGTTCHITQLRVYALNAVGVIPEELSNLTYLTYFKVDQNYLTGPLPAFIGNLTELETLSVGINALSGPIPEELGLLRNLKLLAIGSNYFTGSLPPQLGNLVNLEQIYMDSSGVGGEIPLTFANLVNMQQLWAADNPFTGQIPDFIGNWTKLTVLRFQGNAFVGPIPSSFSNLTSLTDLRISDLSNVSSTLDFIKNMTGLTSLVLRNNLISGGIPSDIGEYQNLLRLDLSFNNLTGRIPSSLFNLSSLTYLFLGNNSLSGPLPSEKSSTLITVDLSYNELSGSFPSWVTQSNFNLNLVANNFTNDNSSNSVLDLGLNCLQRSFPCNRDSPRYSSFAINCGGLEKTSSSGIVFESDNSTLSPASYYVTDTRRWAVSNVGLFTDNSEGTTYTQNTLSQITNTLDSELFQTERLSPGSLRYYGLGLENGIYNVNLQFSEIQFIDNSSRTWQSLGRRVFDIYLQGNRELKDFDIRKEAGGVSFRAVTRTFKAQVSENFLEIHLFWAGKGTCCIPVQGYYGPSISAISVTPDFDPTVSNLPPTTPTKKKTGLIVGIAVAVGVISFISVFVVYYLRKRKRASSNDEEVLLGIDAKPNTFSYAELRTATEDFNPTNKLGEGGFGPVYKGMLPDGRAVGVKKLSVASHQGKSQFVTEIATISAVQHRNLVKLYGCCIEGDNRLLVYEYLENKSLDQALFGNSGLHLDWPTRYEICLGTARGLAYLHEESRPRIVHRDVKASNILLDTDLNPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVTLEIVCGRPNSDSSLDQEKIYLLEWAWNLHENNRVLELVDPTLTNFDEGEAIRMIRLALLCTQASPMLRPPMSRVVAMLSGDMEVSTVTSRPSYLTDWQYTDTSTIVTDGTSGSFMSQGISSQLDTANQSPIVVTQPMLHEIIGEGR* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01538 1035 Gene3D Ribonuclease Inhibitor 41 213 IPR032675 -
Eupl06g01538 1035 CDD STKc_IRAK 705 967 - -
Eupl06g01538 1035 Gene3D Transferase(Phosphotransferase) domain 1 775 981 - -
Eupl06g01538 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 281 404 - -
Eupl06g01538 1035 ProSiteProfiles Protein kinase domain profile. 699 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01538 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Eupl06g01538 1035 SMART serkin_6 699 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01538 1035 FunFam Os05g0263100 protein 43 280 - -
Eupl06g01538 1035 Pfam Malectin domain 428 616 IPR021720 -
Eupl06g01538 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 775 979 - -
Eupl06g01538 1035 FunFam Leucine-rich repeat receptor-like protein kinase 426 620 - -
Eupl06g01538 1035 FunFam Leucine-rich repeat receptor-like protein kinase 668 774 - -
Eupl06g01538 1035 SUPERFAMILY L domain-like 97 414 - -
Eupl06g01538 1035 SUPERFAMILY Protein kinase-like (PK-like) 681 967 IPR011009 -
Eupl06g01538 1035 Gene3D - 427 621 - -
Eupl06g01538 1035 Gene3D Phosphorylase Kinase; domain 1 660 774 - -
Eupl06g01538 1035 Pfam Protein kinase domain 702 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01538 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 998 - -
Eupl06g01538 1035 Gene3D Ribonuclease Inhibitor 221 423 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01538 Eupl-Chr6 29398660 29415261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01538 97 297 Receptor kinase-like Gene Family AT1G56120 27.753 2.31e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01538 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01538 - - psom:113289970 1470.68