Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01533 ATGGCAGCAACATCGTTAAACAAGATTGAAATAGCTCATCAGATGTACCGTGATGGACGGCATGAGGAAGCATTAGGGTTTTATACTGAAGCACTTGCGATGGCGAAAACAAAAGCTCAGAAGATCGCTCTGCACAGCAATCGAGCTGCTTGCTATTTGAAATTGCATGATTTCAAGAAGGCAGCAGAAGAATGTACGTTGGTGCTCGAGCTGGATCACAAGCACACCGGAGCGTTAATGCTGCGTGCCCAGACACTAGTCACCCTCAGAGAGTACCACTCAGCACTCTTTGATGTCAACAGGCTCATGGAGCTCAATCCATCATCAGATGTGTATCAGAACCTGCAAGCCCGTCTGAAGACACAATTGTCGCTGGCCCCCATTCCTGAATCTGAAGAAGAATCATTGGTGGCTGAGCTAGATGAAGATCTTGAAGAAGAAGAACAGGAAGAAGAAGAAGAGGAAGAACAAGGAGGAGAATTGGAAGAAGTGGAAGAAGAAAAAGAAGAAAAAGAAAAACTAGTGGTTGCAGGAGCATGTGCGGATCAGAAAACAGAGACCACAAGGACCATTTCTAATCCTGAAGTTCCTGCCCCCCAAACACAGAGCCTCGATGACTTAACAGATTTACATTCAAAAGGATGGGAAGCAATCCCAAAACCGAAAGGCCACTCCAATCTGGACTATTCACGGTGGGACAGAGTAGAAGACGATTCAAGTGAAGATGAAGAAGATGAAGATGAGGAGTCACAGCCTCAGTATCGGTTCCGTGTAAGAACTGTTGGGGTACGATCAGTGAAGTGA 804 0.459 MAATSLNKIEIAHQMYRDGRHEEALGFYTEALAMAKTKAQKIALHSNRAACYLKLHDFKKAAEECTLVLELDHKHTGALMLRAQTLVTLREYHSALFDVNRLMELNPSSDVYQNLQARLKTQLSLAPIPESEEESLVAELDEDLEEEEQEEEEEEEQGGELEEVEEEKEEKEKLVVAGACADQKTETTRTISNPEVPAPQTQSLDDLTDLHSKGWEAIPKPKGHSNLDYSRWDRVEDDSSEDEEDEDEESQPQYRFRVRTVGVRSVK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01533 267 Coils Coil 130 174 - -
Eupl06g01533 267 MobiDBLite consensus disorder prediction 143 267 - -
Eupl06g01533 267 SMART tpr_5 2 38 IPR019734 GO:0005515
Eupl06g01533 267 SMART tpr_5 76 109 IPR019734 GO:0005515
Eupl06g01533 267 SMART tpr_5 42 75 IPR019734 GO:0005515
Eupl06g01533 267 MobiDBLite consensus disorder prediction 143 167 - -
Eupl06g01533 267 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 267 - -
Eupl06g01533 267 Gene3D Tetratricopeptide repeat domain 2 125 IPR011990 GO:0005515
Eupl06g01533 267 MobiDBLite consensus disorder prediction 183 208 - -
Eupl06g01533 267 SUPERFAMILY TPR-like 10 122 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01533 20 123 Calmodulin-binding Proteins AT3G25230 37.615 1.02e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01533 - - nnu:104609481 337.806