Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01529 ATGGGGAAAAAGAAGAAAGTAATTCTCCCGCCTCAGCTTCCCCCGGAGGTCGCAGAGGACGAGATTGAGGTCTCCGATGAGGATTTGCAGTTCGTGAAGGACAATCGAGAGTACGCTGGATTTCTTAAAAGTTTAGACACTCAATCGATTACCAAGCATGTGACTCGTGTTGCGGATCAGAAAGAAGATGCTTTAGAGTCTTTGTACGAGAATCGTATTAAAAAGAAGTATTTGGAGAAAGAGACGGAGGAAGACGGGCTCGAAGTCGACCCGGTAGATGCCCTTCCCTTCAAGACCTTAGATGGAAAACTGTATTACAGAACAGTTTCGAAGGAATCTAAAAAATCTGTAAATGCACCTAAGGAAGATGAAGGTGCGATAGATGAGAAAGATAATGGTACGGATAAAAGTACCGTGAAGCTTACAAAAGTAGAAAGGAGAGCAAAGCTGAAGAAAAGTAAGAAAGAGGCAAAGAAGCAAGCAAATGAGCCGGTTAAGACAGAGGAGATGCAAGGAAATCCTCAAGTAGAAGTGCTGGCTGAGGTGAAAGAAGACCTTTCAGCTGAAGAAATATCTGCAAGAAAGAAGAGTAAACTCGCGGAGTTGGGAATGGCCCTGCTTGCTGATCCAGAGTCAAATATTAAATCCTTAAAAGAGATATTGCAGATTTCTAAAGATGAAGATCATAATATTGTTAAACTTGGGATGCTGTCTTTGTTGGCTGTTTTCAAAGACATTATTCCTGGCTATCGTATCAGACTACCCACCGAAAAGGAGTTGGAGATGATTGTTTCTAAGGTAGTAAAGAAGATGCGCTACTATGAATCCATGCTTCTGTCCTCATACAAGGCATACCTGCAGAAGCTGATAGCCTTAGAACAGCAGTCCTCTTTTCAACATGTTGCCATTCGTTGTATGTGTACTTTGCTGGATGCCATTCCCCACTTCAACTTCCGTGAGAACTTATTAGCTGCTGTTATCAAGAACATAAGCTCCCCAGATGATGCCATAAGGAAACTCTGCTGTACAACTGTAAAATCGCTTTTTGCTAACGAGGGAAAGCATGGTGGTGAAGCAACTGTGGAGGCTGTTCAATTGATTGCAGATCATGTCAAGATTCATGATTGTCAGTTACATCCTGATTCAATTGAGGTTTTCCTGTCCTTGTCATTTGATGAGGATCTTGGGAGGTCCAAATTACCAAAGGAGGATGAAAAAGTTAATAACAAGAAAAAAAATAGAAGGAAAAATTATGAAGAGACAAAAAAGTTGCAAGCCAGCGAAAAAAAGAGAAGCAGGCAGGATTTGATGGCAAAGACAAGAGAGGAGGTGAATGCTGATTTCAAGGCTGCTTCATTTGCCCCTGACGTGTTGGAGTGTAGAAGGATGCAGTCGGAAACACTTTCAGCTGTATTTCAGACATACTTTCGCATTTTGAAGCATACTATGCAGCCAGCTGCAACTAGGTCTAAAATGAACACTAGTTCTTTATTTGGTGGGTTTGGGGCACACCCACTACTCGCTCCATGCTTGAATGGATTGGGGAAATTCTCTCATCTAATCGACATAGATTTTATGGGCGATCTTATGAATTCCCTCAAAACGCTTGCCTGTGGTGGTAGCAACTATGAGGGTTCCCATGAAAACTGTTTGACTGTTTCTGAACGTCTCCGATGCTGCATTGTTGCATTCAAGGTGATGAGGAAAAATCTCGATGCCTTGAATGTCGATCTACAAGAGTTTTTTGTTCAGCTTTACAATCTACTACTTGAATACAGACCTGACAGAGATCAGGGTGAAGTGTTGGCTGAAGCTCTGAAGACAATGTTGTGTGAAGGAAGACAACATGACATGCAAAGGGCAGCTGCATTCATAAAACGCTTGGCTACTTTTTCTTTATGCTTTGGATCTGCAGAGGCAATGGCAGCCTTGGTTTCATTGAGGGATCTACTTCAGAAGAATGTCAAGTGCCGGAATCTGTTAGAAAATGATGCTGGCGGTGGTTCACATTCAGGTTCAGTTGCGAGATATCAGCCATGTGCCTCGGATCCAAACCAAAGCGGCTCGCTTGCTTCTGTTCTTTGGGAACTAAGTTTGCTGTGCAAGCACTATCATCCTGCTGTTTCAACAGCGGCTTCCAGCATTTCAGGCATGAGCAGTGCTCATAATCAGGTGTACCTGCCCACCACTTCTCCCCAACAAGCTTTTATGGACTTCTCGATCGAACAGGAGTTGTTCAACCCAAAGAGTAACCCAGGGACATCAAGCCGTAAGAGGAAAAAGGGTAGTGGGTCCATATCGAGTATTGATGAGCAGACTCAGGATCTAGTCAATTCAAGAGATGAAGAGGATGTGAAAAAGAGATTCTCAAAGCATTTCTTGGTGCTTAGGGGCATCACAGAGAACGAGAGACTGAGGAGAGAGTTGAATCATACTGTGTCATCCATAAGTTTGTACGAAGAATATAAGAGGCAAAAGAAGAAAAAACTTAGAGTTTCAAAGACGAGAACTACAAAGAGAGTGACTTTTAAGAGCTAG 2538 0.4271 MGKKKKVILPPQLPPEVAEDEIEVSDEDLQFVKDNREYAGFLKSLDTQSITKHVTRVADQKEDALESLYENRIKKKYLEKETEEDGLEVDPVDALPFKTLDGKLYYRTVSKESKKSVNAPKEDEGAIDEKDNGTDKSTVKLTKVERRAKLKKSKKEAKKQANEPVKTEEMQGNPQVEVLAEVKEDLSAEEISARKKSKLAELGMALLADPESNIKSLKEILQISKDEDHNIVKLGMLSLLAVFKDIIPGYRIRLPTEKELEMIVSKVVKKMRYYESMLLSSYKAYLQKLIALEQQSSFQHVAIRCMCTLLDAIPHFNFRENLLAAVIKNISSPDDAIRKLCCTTVKSLFANEGKHGGEATVEAVQLIADHVKIHDCQLHPDSIEVFLSLSFDEDLGRSKLPKEDEKVNNKKKNRRKNYEETKKLQASEKKRSRQDLMAKTREEVNADFKAASFAPDVLECRRMQSETLSAVFQTYFRILKHTMQPAATRSKMNTSSLFGGFGAHPLLAPCLNGLGKFSHLIDIDFMGDLMNSLKTLACGGSNYEGSHENCLTVSERLRCCIVAFKVMRKNLDALNVDLQEFFVQLYNLLLEYRPDRDQGEVLAEALKTMLCEGRQHDMQRAAAFIKRLATFSLCFGSAEAMAALVSLRDLLQKNVKCRNLLENDAGGGSHSGSVARYQPCASDPNQSGSLASVLWELSLLCKHYHPAVSTAASSISGMSSAHNQVYLPTTSPQQAFMDFSIEQELFNPKSNPGTSSRKRKKGSGSISSIDEQTQDLVNSRDEEDVKKRFSKHFLVLRGITENERLRRELNHTVSSISLYEEYKRQKKKKLRVSKTRTTKRVTFKS* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01529 845 SUPERFAMILY ARM repeat 218 615 IPR016024 -
Eupl06g01529 845 MobiDBLite consensus disorder prediction 747 782 - -
Eupl06g01529 845 Pfam CBF/Mak21 family 557 712 IPR005612 -
Eupl06g01529 845 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 820 IPR016903 -
Eupl06g01529 845 MobiDBLite consensus disorder prediction 111 172 - -
Eupl06g01529 845 MobiDBLite consensus disorder prediction 401 435 - -
Eupl06g01529 845 MobiDBLite consensus disorder prediction 747 774 - -
Eupl06g01529 845 PIRSF Noc3 1 813 IPR016903 -
Eupl06g01529 845 MobiDBLite consensus disorder prediction 111 144 - -
Eupl06g01529 845 Pfam Nucleolar complex-associated protein 195 285 IPR011501 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01529 1 809 Core DNA Replication Machinery Family AT1G79150 57.875 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01529 K14834 - nnu:104596828 1177.93