Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01522 ATGTGGAACCAAGAATGCTTTCCCTTCTATGGAAATGGAGCTAGCAATTTAATTCCACTAGAAATTGATAACATGTCGTCGGTTTTCGCGACGACTTCATTTTTTCAGCGACTTGGGATTCCAGCAATGGACATGGCTGAGCCCGCATTGCCGGAATTCAATATGGGTTTACATTACAACGCGGGAATTCAGAGTTTCGGAGCAGAATTCCAGCCAGAACCATATGAGTTTGCTGATATTAAATGTAACCGGTTTTCATCAGATTTCTGTCCCGTTTATGGCTGCCGGGATGTTTGGGGAATTCAAGGTAATTCGTTACCAACGATTGAAGAACCAAATACGAAAGTTGGTCGTTACTCAGCAGAAGAAAGGAAGGATAGAATTCTCAAGTACTTGAAGAAGAGAAATCAAAGAAATTTCAACAAAACCATCAAGTACGCTTGCCGGAAAACACTAGCCGATAGGCGAATACGAGTTCGTGGGAGATTTGCAAGGAACAATGAACGAGGGAAAGAATCTCAGACTTTGAAGAACGATAATAATCACCAAGAAGATGAGGAAGAAGCATACTATGATGATGGTGCACAGATCAAACAAAATGGGGAGGAGTGGTTACAAGAGGCTGTCACAAGTCTCATGTATCTACCCATTTTTGATGGATGA 663 0.4178 MWNQECFPFYGNGASNLIPLEIDNMSSVFATTSFFQRLGIPAMDMAEPALPEFNMGLHYNAGIQSFGAEFQPEPYEFADIKCNRFSSDFCPVYGCRDVWGIQGNSLPTIEEPNTKVGRYSAEERKDRILKYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNERGKESQTLKNDNNHQEDEEEAYYDDGAQIKQNGEEWLQEAVTSLMYLPIFDG* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01522 220 Pfam CCT motif 124 166 IPR010402 GO:0005515
Eupl06g01522 220 ProSiteProfiles CCT domain profile. 124 166 IPR010402 GO:0005515
Eupl06g01522 220 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 91 184 IPR045281 GO:0009909
Eupl06g01522 220 MobiDBLite consensus disorder prediction 163 184 - -
Eupl06g01522 220 MobiDBLite consensus disorder prediction 163 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01522 Eupl-Chr6 28699084 28700453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01522 120 168 C2C2-CO-like Transcription Factor Family AT5G57660 48.980 3.58e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl06g01522 CCT 8.9e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01522 - - nnu:104609465 276.559