Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01510 ATGGATTGTTTACTACCCTCTGCTCGGGTCAATATTTTACCTAGAGGATTGCCTTTGGTGGCACTCATCCTATGGTGGGTCCCAACCCCCCTGCATGTATCCCGTGTATATTTGATAAATGGGAGATGGCTTGGTTTGCTCTCTCATCTTGATACTGGGACATGGCTTGTTTTGTTCTATCATCTTGATACTGGGAGATGGCTTGTTTTGATCTCTCATCTTGATACTGGGGGATGGCTTGTTTTGTTCTCTCATCTTGATACTAATACTCCTGGGAAGTCTACACTTACCGATTCTCTTGTGGCTGCGGCCGGTATCATTGCTCAAGAAGTCGCAGGAGATGTCAGGATGACAGATACTCGCCAGGATGAAGCTGAGCGTGGCATCACGATCAAATCTACTGGGATCTCTCTTTATTACGAGATGAGTGATGCTTCTTTAAAGAGCTACAAGGGAGAACGACAAGGGAACGAGTATCTCATCAACCTGATTGATTCCCCTGGGCATGTTGACTTCTCGTCTGAGGTCACTGCTGCTCTCCGTATCACTGATGGTGCACTTGTGGTGGTTGACTGTGTTGAGGGTGTTTGTGTCCAAACTGAAACTGTCCTGCGACAAGCCCTTGGAGAAAGGATCAGGCCTGTCTTGACTGTCAACAAGATGGACCGGTGCTTCCTCGAGCTCCAAGTTGATGGAGAGGAGGCGTACCAAACCTTCCAAAGAGTGATTGAGAATGCTAATGTCATCATGGCCACATACGAAGATACACTCCTGGGAGATGTACAGGTTTACCCTGAGAAAGGAACTGTTGCCTTCTCTGCTGGTTTGCATGGTTGGGCTTTCACCCTAACCAACTTCGCCAGGATGTATGCTTCTAAGTTTGGTGTTGATAAGTCTAAGATGATGGAGAGGCTTTGGGGTGAGAACTATTTTGACCCTGCGACCAAGAAATGGACCAGCAAGAGCACTGGGTCTGCCACCTGCAAGCGAGGTTTTGTCCAGTTCTGTTATGAACCAATCAAGCAGATTATCAACACTTGCATGAATGATCAGAAGGACAAGCTGTGGCCGATGTTGCAGAAGCTTGGTGTCACCATGAAGTCTGAGGAGAAGGATTTGGTTGGGAAGGCCTTGATGAAACGTGTGATGCAGACCTGGCTCCCGGCGAGCAGTGCCCTACTAGAAATGATGATCTTTCACCTTCCATCTCCTGCCAAGGCTCAGAAATACCGTGTTGAGAACTTGTACGAGGGTCCTCTTGACGATGTCTATGCCAATGCAATTAGGAACTGTGATCCCGAAGGGCCTCTTATGCTCTATGTCTCAAAGATGATTCCTGCATCTGACAAGGGCAGGTTCTTTGCTTTTGGTCGTGTATTCTCTGGAAAGGTTTCAACTGGTTTGAAGGTTAGAATCATGGGACCAAACTACGTCCCTGGCCAGAAGAAGGACTTGTATGTTAAGAGTGTGCAAAGAACTGTCATTTGGATGGGGAAGAAGCAGGAATCGGTTGAGGATGTGCCCTGCGGGAACACAGTTGCTCTGGTTGGTTTGGATCAATTCATCACCAAGAATGCAACCCTGACGAATGAGAAGGAAGTGGATGCCCATCCGATCCGAGCCATGAAATTCTCCGTCTCACCTGTTGTTCGAGTTGCAGTGCAGTGTAAGGTTGCATCTGACCTTCCCAAGCTTGTTGAAGGTCTTAAACGTCTGGCTAAGTCGGATCCTATGGTGGTGTGCATGATTGAGGAGTCTGGTGAGCACATCATTGCAGGTGCTGGAGAACTCCACCTCGAGATCTGCTTGAAGGACTTGCAGGAAGATTTCATGGGTGGGGCAGAAATTATACAGTCTGATCCAGTTGTCTCCTTCCGTGAGACTGTGCTTGAGAAGTCGTGCCGGACTGTGATGAGCAAGTCTCCCAACAAGCACAACCGTTTGTACATGGAAGCGCGACCCATGGAGGAAGGTCTTGCGGAGGCCATTGATGATGGGCGTATTGGCCCAAGGGACGACCCCAAGGTTCGTGCCAAGATCTTGTCTGAGGAGTTTGGGTGGGACAAGGATCTCGCAAAGAAGATCTGGTGTTTTGGCCCTGAGACTACTGGCCCGAACATGGTCGTTGATATGTGTAAGGGAGTTCAGTACCTGAACGAAATCAAAGACTCAGTTGTGGCTGGATTCCAGTGGGCATCAAAGGAAGGTGCTCTGGCGGAAGAAAACATGAGGGCCATTTGCTTTGAGGTCTGTGACGTGGTTCTCCATGCTGATGCCATCCACAGAGGAGGTGGGCAGGTTATCCCGACAGCTAGAAGGGTCATCTATGCTTCCCAGCTCACTGCCAAGCCTAGGCTCTTGGAGCCTGTCTACCTGGTTGAGATCCAGGCTCCCGAGCAGGCTCTTGGTGGTATCTATGGTGTTCTTAACCAGAAGCGTGGTCATGTCTTTGAGGAAATGCAGAGGCCGGGAACACCGCTTTACAACATCAAGGCCTACCTTCCTGTCATTGAGTCGTTTGGATTCTCGAGTACACTCAGGGCTGCAACCTCGGGGCAGGCATTCCCTCAGTGTGTTTTTGATCACTGGGACATGATGTCCTCTGACCCGTTGGAGCCTGGATCACAGGCTGCCCAACTGGTGACGGATATCCGGAAAAGGAAGGGCTTGAAGGAGCAGATGACCCCGCTCTCTGAGTTCGAGGACAAGCTATAA 2715 0.4958 MDCLLPSARVNILPRGLPLVALILWWVPTPLHVSRVYLINGRWLGLLSHLDTGTWLVLFYHLDTGRWLVLISHLDTGGWLVLFSHLDTNTPGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDASLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDTLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFARMYASKFGVDKSKMMERLWGENYFDPATKKWTSKSTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLVGKALMKRVMQTWLPASSALLEMMIFHLPSPAKAQKYRVENLYEGPLDDVYANAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCMIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIQSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRAKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYGVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQAAQLVTDIRKRKGLKEQMTPLSEFEDKL* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01510 904 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 78 405 IPR000795 GO:0003924|GO:0005525
Eupl06g01510 904 SUPERFAMILY Ribosomal protein S5 domain 2-like 623 787 IPR020568 -
Eupl06g01510 904 SUPERFAMILY EF-G C-terminal domain-like 545 621 IPR035647 -
Eupl06g01510 904 FunFam Translation elongation factor 2 404 545 - -
Eupl06g01510 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 402 IPR027417 -
Eupl06g01510 904 Pfam Elongation factor Tu GTP binding domain 85 403 IPR000795 GO:0003924|GO:0005525
Eupl06g01510 904 Gene3D - 630 783 IPR014721 -
Eupl06g01510 904 Gene3D - 784 904 - -
Eupl06g01510 904 CDD aeEF2_snRNP_like_IV 620 792 - -
Eupl06g01510 904 FunFam Translation elongation factor 2 547 624 - -
Eupl06g01510 904 FunFam Translation elongation factor 2 80 298 - -
Eupl06g01510 904 Pfam Elongation Factor G, domain III 548 610 IPR041095 -
Eupl06g01510 904 Pfam Elongation factor Tu domain 2 455 528 IPR004161 GO:0005525
Eupl06g01510 904 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 91 903 - -
Eupl06g01510 904 Pfam Elongation factor G, domain IV 672 783 IPR005517 GO:0005525
Eupl06g01510 904 NCBIfam small GTP-binding protein domain 92 238 IPR005225 GO:0005525
Eupl06g01510 904 FunFam Translation elongation factor 2 630 783 - -
Eupl06g01510 904 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 119 134 IPR031157 -
Eupl06g01510 904 CDD EF2_snRNP_III 548 620 - -
Eupl06g01510 904 Gene3D Translation factors 404 545 - -
Eupl06g01510 904 SMART EFG_IV_2 667 783 IPR005517 GO:0005525
Eupl06g01510 904 CDD EF2 92 291 - -
Eupl06g01510 904 Pfam Elongation factor G C-terminus 785 871 IPR000640 -
Eupl06g01510 904 Coils Coil 897 904 - -
Eupl06g01510 904 CDD eEF2_snRNP_like_C 788 866 - -
Eupl06g01510 904 Gene3D Elongation Factor G (Translational Gtpase), domain 3 547 624 - -
Eupl06g01510 904 FunFam Elongation factor 2 283 387 - -
Eupl06g01510 904 SMART EFG_C_a 785 874 IPR000640 -
Eupl06g01510 904 FunFam Translation elongation factor 2 784 904 - -
Eupl06g01510 904 Gene3D - 69 273 IPR027417 -
Eupl06g01510 904 SUPERFAMILY EF-G C-terminal domain-like 788 899 IPR035647 -
Eupl06g01510 904 CDD EF2_II 436 531 - -
Eupl06g01510 904 Gene3D Yeast translation eEF2 (G' domain) 283 387 - -
Eupl06g01510 904 SUPERFAMILY Translation proteins 403 537 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01510 Eupl-Chr6 28268398 28273638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01510 80 904 Eukaryotic Initiation Factors Gene Family AT1G56070 90.424 0.0 1570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01510 K03234 - ming:122079615 1585.47