Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01508 ATGTCGTCGCCGCCACCACCACAGGCTTCTAGCTACGCATTCATATTGAAGGTTGGCTTACCTAACCTATATCAGAAAAATTCCTGTCGTGAGGTTCTCATTTTCCATGAACAAGAAATGAGAAACTCTCAGGGAATTAGAGTGAGGCACTACAACAAATCTGAAGTTCCGCGACTGCGGTGGACGCCTGATCTTCACGAACTCTTCGTCGAAGCCGTCAATCACCTTGGTGGAAAACACAAAGCTACACCAAAGCGTATTCTCCAACTGATGAGTGTGAAAGGACTGAGGATATCTCATATCAAAAGCCATCTTCAGCAGATGCAGAGAAGCATGAAGAATGGCACGAATTTCGAAGTCCTTTTAGCTGAAAATCATTTACATAACAAGAGGACACATTTGAATGATCTCAGCACCGATTGTATCTCCATGTCTACCAGCAATTGCTCCCTCCAGAGGCCATTAGAGGATGAACAAAGAGAATGGGAATCCGAGAGGAGAGACTATGAACAAGAAACCTTTTGGATAGAAGGAAATGAACTTCACCGAGCAAAAGAAGATACAGAGAGATATGAAAATCAGAATATACACATGAACCCACTTCATGGATTACTCAAAGAAGATGTTGGTGCAGGCCCAAGTGATAGTTGTGAGCTATCATTATCCTTATCTGCTTCACCAGTAAATAGAAGTGAAAAGGAGAGTGAATTATGGCCTTCAAGTAGACATTTACAGATCTCTAGTAGAAGCAGAAATGACACTAATATCATTGGCGATGACTCTCTTAAAGAAAAGTACATAAACCTTGATTTAACCATCTCATCAAGTTTCTCATACTAG 840 0.4131 MSSPPPPQASSYAFILKVGLPNLYQKNSCREVLIFHEQEMRNSQGIRVRHYNKSEVPRLRWTPDLHELFVEAVNHLGGKHKATPKRILQLMSVKGLRISHIKSHLQQMQRSMKNGTNFEVLLAENHLHNKRTHLNDLSTDCISMSTSNCSLQRPLEDEQREWESERRDYEQETFWIEGNELHRAKEDTERYENQNIHMNPLHGLLKEDVGAGPSDSCELSLSLSASPVNRSEKESELWPSSRHLQISSRSRNDTNIIGDDSLKEKYINLDLTISSSFSY* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01508 279 Pfam Myb-like DNA-binding domain 59 108 IPR001005 -
Eupl06g01508 279 FunFam Two-component response regulator 52 114 - -
Eupl06g01508 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 113 IPR017930 -
Eupl06g01508 279 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 41 167 IPR046955 GO:0003700
Eupl06g01508 279 SUPERFAMILY Homeodomain-like 57 113 IPR009057 -
Eupl06g01508 279 Gene3D - 56 113 - -
Eupl06g01508 279 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 108 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01508 Eupl-Chr6 28238134 28249030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01508 41 111 G2-like Transcription Factor Family AT1G14600 58.904 3.00e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl06g01508 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01508 - - nnu:104608101 211.46