Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01502 ATGGAAGTTCAGAAGATGGGTGATTCAGAAAACAAGGATGAAGAAGTTCTGCTTCCAGGGTTTCGGTTCCATCCAACTGATGAAGAGCTTGTTGGGTTTTATCTCCGGCGTAAGGTGGAGAAGAAACCGTTGAGTATAGAACTTATCAAACAGATGGATATCTACAAATATGATCCCTGGGATCTTCCAAAAGTTAGTACTGTCGGCGAAAAGGAGTGTTACTTCTTTTGCATAAGAGAAAGAAAGTATAGGAATAGCATAAGACCCAATAGGGTCACAGGATCTGGATTTTGGAAGGCAACTGGGATCGACAGGCCAATATATTCTGTTGGAGAAACCAATGATTGCATAGGCCTCAAGAAATCCTTAGTCTACTATAGAGGAAGTGCAGGAAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGCCTTCCCGCTAGCGGAAAAAGCACCACCAATAATTCCAACACCAAGAATACTACTCAAGAAGCTGAAATTTGGACACTTTGTCGAATTTTCAAGCGAAACGTGACTTATAGGAAGTATGTACCAGATTGGAGAGAGACCTCGTCCATCAAGCAAAACCCAAGTGATTCAAGTTCTCAAACATGCAGCTTTGAGTCTGACAATACAGAGAAATACAAGTGTTTTGGAACATCAGTCGTCGCTCAAAAGAATGAGAAGAAGCCAGTTCTAAATCAAGTTGAAGAAAGAAATCATTTGCTATCGGCCCAGTTGAACCCGATAACTCAAGCTCCATTTACAGCATTTTACTCGAGCTTTCCAAACCCCAATGGCAATGACTTCTTCAGAGATGGGAATTGGGATGAGCTCGGATCAATAGTGGAGTTCGCGTCTGATCCATCCCATCTGTATGGTTGTAGATAG 891 0.4198 MEVQKMGDSENKDEEVLLPGFRFHPTDEELVGFYLRRKVEKKPLSIELIKQMDIYKYDPWDLPKVSTVGEKECYFFCIRERKYRNSIRPNRVTGSGFWKATGIDRPIYSVGETNDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPASGKSTTNNSNTKNTTQEAEIWTLCRIFKRNVTYRKYVPDWRETSSIKQNPSDSSSQTCSFESDNTEKYKCFGTSVVAQKNEKKPVLNQVEERNHLLSAQLNPITQAPFTAFYSSFPNPNGNDFFRDGNWDELGSIVEFASDPSHLYGCR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01502 296 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 225 - -
Eupl06g01502 296 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Eupl06g01502 296 Gene3D NAC domain 26 180 IPR036093 GO:0003677|GO:0006355
Eupl06g01502 296 SUPERFAMILY NAC domain 12 176 IPR036093 GO:0003677|GO:0006355
Eupl06g01502 296 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Eupl06g01502 296 FunFam NAC domain-containing protein 35 26 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01502 Eupl-Chr6 27870454 27872403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01502 3 207 NAC Transcription Factor Family AT5G39820 53.571 6.41e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl06g01502 NAM 4.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01502 - - ming:122062909 478.404