Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01485 ATGGAAACAGAGATGCAGAATCACAGAGGTTCATGGGTGAGAGGGAAGATCATTGGAGCAGGAAGCTTCGGCAGCGTTTTTCTGGCCACAACCCACAAGAAGCGACGTCGTCGAAGCTACCTCCCCCCTGTAATAGCCGTGAAATCAACCGACCTCAGTCTATCAAAATCCCTTGAGAAGGAGAAACAGGTACTCACTGACCTCCAAGACTGTCCGTACATTATAGGTTGCTATGGAGACGATATAACAATTGAGAAGAACAACCAGTTTATGTACAATGTGTTATTGGAGTACGCATCTGGAGGCTCCTTAGCCAATCGAATCAAGACTTCCGGCTGCGGATTACCAGAATCCGAAGTTATTCGCTACACCCGATCAATTCTTCAAGGGCTTAACCACATTCATCAACGTGGTTATGTGCATTGCGATATCAAGCCTCACAACATCCTACTCGTCCAATCTCCATCATGTTCTTCACATTATGTAGCGAAGCTTGCTGATTTCGGGCTTTCGAAGAAAGTTGGCTGCCCAAAGAAGAACAAAGAGAGGGTTCGTTTCAGGGGTACCCCTCTGTACATAGCACCCGAGTCTATCGTCTCTAATGAATACGAGCCTCACTCGGATATATGGTCTCTTGGGTGTGCCGTGATAGAGATGTTAACTGGACAACCAGCTTGGAAGTGTAAACCGGGCACTGATGAGTTGTATAATCTCTTGATTCTGATTGGTTGTACTGAGGAATTCCCCGCAATATCAGGACAGATGTCGAACGAGGCTCAGCATTTCGTGAAGAAGTGCTTGGTAAGGGATACGGTGTTTCGGTGGCCAGCTTATATGCTCTTGAGGCATCCCTTTCTTGAGCAAGGAGAGGAGTCTTCGGTTTCGGATTGCCCTGTTTTTAGCAAGAAAAAGAGGACGACAGATGAGGTCGAGGAGGTGGCGGGAGAGTGGCCTTCTTTTGATGAGATCAAGGAGGACAACAGTTACTATTACAGTATGACCGAATGA 1008 0.4692 METEMQNHRGSWVRGKIIGAGSFGSVFLATTHKKRRRRSYLPPVIAVKSTDLSLSKSLEKEKQVLTDLQDCPYIIGCYGDDITIEKNNQFMYNVLLEYASGGSLANRIKTSGCGLPESEVIRYTRSILQGLNHIHQRGYVHCDIKPHNILLVQSPSCSSHYVAKLADFGLSKKVGCPKKNKERVRFRGTPLYIAPESIVSNEYEPHSDIWSLGCAVIEMLTGQPAWKCKPGTDELYNLLILIGCTEEFPAISGQMSNEAQHFVKKCLVRDTVFRWPAYMLLRHPFLEQGEESSVSDCPVFSKKKRTTDEVEEVAGEWPSFDEIKEDNSYYYSMTE* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01485 335 SMART serkin_6 12 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01485 335 Pfam Protein kinase domain 14 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01485 335 Gene3D Phosphorylase Kinase; domain 1 5 105 - -
Eupl06g01485 335 ProSitePatterns Protein kinases ATP-binding region signature. 18 48 IPR017441 GO:0005524
Eupl06g01485 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Eupl06g01485 335 CDD STKc_MAPKKK 11 286 - -
Eupl06g01485 335 SUPERFAMILY Protein kinase-like (PK-like) 6 299 IPR011009 -
Eupl06g01485 335 Gene3D Transferase(Phosphotransferase) domain 1 106 332 - -
Eupl06g01485 335 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 9 304 - -
Eupl06g01485 335 ProSiteProfiles Protein kinase domain profile. 12 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01485 Eupl-Chr6 27209572 27210712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01485 12 286 MAP Kinase Kinase Kinase AT3G50310 49.819 1.80e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl06g01485 Pkinase 5.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01485 - - nnu:104609171 319.701