Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01484 ATGGCGTCGAAAAACTCCTCGTCTCTATCGCCAGCTCCTCCTGCCCCTCCTCCTCCATCATCGACATCTAAGGTTAGCCCAGAATCCGTTGGAAAAGCCGTAGACGCCCTTCTGAAATGGATCAAATCGAAAGCCAAACACCAGAAATCCCAACTCTTAGAACACGACGACTTCCTCTACCTCATCTTAACCCTAAAAAAAATCCCCCCCAAAGGACGCACCAACCCGTTCAAGATCCCTCTCCCCCACCCTCTCCACCCCTTCGACGCCTCCGAAGAGCTCTGCCTCATCATCGACGACCGCTCCAAAGGCCACCTCACCTCCGACTCCGCCAAGAAGAAGATCCAATCTGAAAACATCCCCATATCCAAAGTCCTCAAGCTCTCCAAGCTCAAATCGGATTATCGTCCCTTCGAGGCCAAGCGCAAGCTCTGTAGCTCATTCGATCTATTCTTCGCTGACAAACGGATCATCCACCTCCTCCCCAGGATGTTGGGGAAGCAATTCTTTCAGAAGAAGAAGATTCCGATACCCGTCGAATTGACCCACAAGAACTGGAAAGAGCAGATTCAACAGGCTTGTGGTTCGGCCCTTTTGTATTTGAGGACTGGGACTTGCAGTGTCATTAAGGTCGGTCGGGTTTCTCTGGGCCGCGATGAGATTGTAGCCAATGTGGTTGCTGCTATTGAAGGGGTTGCTGATATTATTCCTAAGAAGTGGGGTAATGTACGCTCGTTTCATTTGAAGTTATCGGAGTCCCTAGCATTGCCCATTTATCAGACTGTGCCCGATATGGGGTTGAAGATTGAGGGAGTCAGGAAGAAAGAGGAGAAATCTGAAGAAGAATCTGGAATGGAGTTGGGCGAAGAAGGCAGGGTGGAAGAGAAGGAGAAGAAGTTGGGGAAGAAGAAGGGAACGAAGAAGGGGAGGATTCACGAAGTTAGGTACATGGATAGTAATGTTGATGAGTTGTTGGGTGGTATATCCGGCGATGATGATGATGAGAGAAATGAAAATGATGAATTGGGTAGTGCTGAATTGAAGGGTAAAAAGAGGAAGAGTGTGGAAAGGCTGAAGATAGAGCGGGTTCTTGATGAGTTAAATGGCGAGAAACAATTGAAGAAATCAGCAAAGGCGAAGAAGGGAGAGGCTGCAAAACAGAAGAAAAATGGCTTGTCTTTGGAGCGCAGAGGTGGAGAAGAAGAATTTGATGGTGAAGTGATAGGTGATATGTCTGTTTCTAGTGTGGTGAAGAAGAAGAAGACAAGTAAAATTGGGAATTCTAAGAGTGGTGAAATGAAGTTGAAGAATAAGAAGAGTAAGAGAATACAAGCAACAGAGTGA 1344 0.471 MASKNSSSLSPAPPAPPPPSSTSKVSPESVGKAVDALLKWIKSKAKHQKSQLLEHDDFLYLILTLKKIPPKGRTNPFKIPLPHPLHPFDASEELCLIIDDRSKGHLTSDSAKKKIQSENIPISKVLKLSKLKSDYRPFEAKRKLCSSFDLFFADKRIIHLLPRMLGKQFFQKKKIPIPVELTHKNWKEQIQQACGSALLYLRTGTCSVIKVGRVSLGRDEIVANVVAAIEGVADIIPKKWGNVRSFHLKLSESLALPIYQTVPDMGLKIEGVRKKEEKSEEESGMELGEEGRVEEKEKKLGKKKGTKKGRIHEVRYMDSNVDELLGGISGDDDDERNENDELGSAELKGKKRKSVERLKIERVLDELNGEKQLKKSAKAKKGEAAKQKKNGLSLERRGGEEEFDGEVIGDMSVSSVVKKKKTSKIGNSKSGEMKLKNKKSKRIQATE* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01484 447 MobiDBLite consensus disorder prediction 273 313 - -
Eupl06g01484 447 MobiDBLite consensus disorder prediction 369 404 - -
Eupl06g01484 447 MobiDBLite consensus disorder prediction 273 301 - -
Eupl06g01484 447 CDD Ribosomal_L1 32 258 IPR028364 -
Eupl06g01484 447 Pfam Ribosomal protein L1p/L10e family 38 253 IPR028364 -
Eupl06g01484 447 MobiDBLite consensus disorder prediction 425 447 - -
Eupl06g01484 447 MobiDBLite consensus disorder prediction 369 447 - -
Eupl06g01484 447 FunFam Ribosomal protein L1p/L10e family 104 195 - -
Eupl06g01484 447 SUPERFAMILY Ribosomal protein L1 24 259 IPR023674 -
Eupl06g01484 447 MobiDBLite consensus disorder prediction 325 351 - -
Eupl06g01484 447 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 32 253 - -
Eupl06g01484 447 Gene3D - 104 194 IPR016095 -
Eupl06g01484 447 MobiDBLite consensus disorder prediction 1 28 - -
Eupl06g01484 447 Coils Coil 360 380 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01484 148 249 Cytoplasmic Ribosomal Protein Gene Family AT5G22440 25.490 4.84e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01484 K14775 - ming:122060559 469.159