Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01473 ATGACTTGTTTCTCTTGTCTATTTGGTAGGAAGCAGGCTTCTTCAGCTAAACAAACGGTTGAAGTTGATGAAGAGGTTTCAGGCATCCATAATGTTGAGATGTACAGCTACAGACAATTGAGAGCGGCCACCGAAGATTTTAGTTTAGCTAATAAAATTGGGGAGGGCGGTTTTGGTTCTGTCTACAAGGGAATACTTAAAGATGGTGTAGCTGCTGCCATAAAGGTACTGTCAGCGGAATCAAGGCAAGGGGTGCGGGAATTTTTAACAGAGATAAATGTCATCTCGGAGATAGAGCATGAAAACCTAGTTAAACTGTATGGTTGTTGCGTTGAAGGAAACCATAGAATTTTGGTTTATGGCTACCTTGAGAATAACAGCCTTGCACAAACTCTTCTAGGTGAACGTAGCAGCATCCAGTTTAGTTGGAAAACACGGTCTAAGATTTGCATCGGCATTGCACGTGGACTTGCGTTCCTCCATGAGGAAGTCCAGCCTCACATTGTTCATAGAGATATCAAAGCAAGCAATATCCTCCTCGACAAAGACCTCAACCCCAAAATTGCGGATTTTGGTCTTGCAAAGCTTCTTCCACCCAACATGACTCACATCAGTACACGTGTTGCAGGAACAATAGGTTATTTGGCACCTGAGTATGCAATACGGGGACAGTTGACACGGAAAGCAGATATTTACAGTTTTGGTGTTCTCCTCTTGGAAATAGTCAGCGGGAGATGCAACAGGGACACACGGTTACCTGCCAAAGAACAATTTCTTCTTGAAAGGACATGGGAACTGTACGAGCGAGGGAAGCTGGTGGAGATGGTGGACGCATCATTGAATGGAGACTTCGATGCTGAGGAGGCTTGCAGGTGCTTGAAGATTGGTCTCCTGTGCACCCAAGACTCACCAAAGCTCCGGCCAACCATGTCGACCGTGGTCAAGATGCTGAGAGGCAAGGAGGATGTGGATGACAATATTACAAAGCCTGGCCTCATTTCTGATTTCATGGACCTCAAAGTTAGAGGAGGCAAAAAAGAAAAGCTTGACACAGCGACTACGTCTTACACCATGTCCTCTAGCTCGGAAAAGCGAGATGGGGATTCATTCTTCTTGTCGGGAAATACCAACTCTTACGGAACAATGACCTTTACTGCCGTATCCGATCGGAGTGGATGA 1179 0.4555 MTCFSCLFGRKQASSAKQTVEVDEEVSGIHNVEMYSYRQLRAATEDFSLANKIGEGGFGSVYKGILKDGVAAAIKVLSAESRQGVREFLTEINVISEIEHENLVKLYGCCVEGNHRILVYGYLENNSLAQTLLGERSSIQFSWKTRSKICIGIARGLAFLHEEVQPHIVHRDIKASNILLDKDLNPKIADFGLAKLLPPNMTHISTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNRDTRLPAKEQFLLERTWELYERGKLVEMVDASLNGDFDAEEACRCLKIGLLCTQDSPKLRPTMSTVVKMLRGKEDVDDNITKPGLISDFMDLKVRGGKKEKLDTATTSYTMSSSSEKRDGDSFFLSGNTNSYGTMTFTAVSDRSG* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01473 392 FunFam cold-responsive protein kinase 1 17 122 - -
Eupl06g01473 392 Gene3D Transferase(Phosphotransferase) domain 1 123 331 - -
Eupl06g01473 392 FunFam cold-responsive protein kinase 1 123 332 - -
Eupl06g01473 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Eupl06g01473 392 Pfam Protein kinase domain 49 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01473 392 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Eupl06g01473 392 CDD STKc_IRAK 53 317 - -
Eupl06g01473 392 ProSiteProfiles Protein kinase domain profile. 47 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01473 392 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 359 - -
Eupl06g01473 392 SMART serkin_6 47 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01473 392 Gene3D Phosphorylase Kinase; domain 1 8 122 - -
Eupl06g01473 392 SUPERFAMILY Protein kinase-like (PK-like) 26 317 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01473 Eupl-Chr6 26970146 26976723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01473 21 332 Receptor kinase-like Gene Family AT1G07650 56.508 3.93e-117 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g01473 Pkinase 8.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01473 - - jre:108996056 575.089