Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01437 ATGACATCTTCTGTGCATGATCTGTCATCTCATTCTGGTATTTTGCCCAAATGCCTGTTTGCGCTCCTATCTTATAGACTATATATTTTGTTCAGAGATGATAGTGGAACTGATGAGCATCAAAAGCAGTCAGACCCTCAGATCCAACATCAGTCCCCTGCAAGTGGAATCTTTCATCCTGGCGTGGCATCGCAGTCTGCTGAGTACATGATGCCTCCTCATCTTGAAGTGGGACATGCTGTGGCCCAAGCAGCGTATCCATATCCAGACCCCTACTACAGAAGCATCTTTGCTGCCTATGGTGCACAACCTATGATTCACCCTCATTTGATGGGAATCCAACAAGCTGGAGTTCCATTGCCATCGGATGCAGTTGAGGAGCCTGTGTATGTCAATGCAAAGCAATATCATGGTATCTTGAGACGCCGACAATCTCGTGCCAAAGCTGAGTCAGAAAATAAATCGATCAAGTCTCGTAAGCCCTATCAACATGAATCTCGACACTTGCATGCCTTGAGAAGAGCTAGGGATGGTGGCGGTCGGTTTCGTAATGCCAAGACCAAGGAGAACCAACGGAGTGAGGTGGCAGCACATGAAAAAGGGAAGCCTAGTGACACTGCCAACGCGGATAAAGACCAAAATGCTCCCCCAGAAAGGGAAACCTAA 666 0.4745 MTSSVHDLSSHSGILPKCLFALLSYRLYILFRDDSGTDEHQKQSDPQIQHQSPASGIFHPGVASQSAEYMMPPHLEVGHAVAQAAYPYPDPYYRSIFAAYGAQPMIHPHLMGIQQAGVPLPSDAVEEPVYVNAKQYHGILRRRQSRAKAESENKSIKSRKPYQHESRHLHALRRARDGGGRFRNAKTKENQRSEVAAHEKGKPSDTANADKDQNAPPERET* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01437 221 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 39 208 IPR001289 GO:0003700|GO:0006355
Eupl06g01437 221 ProSiteProfiles NF-YA/HAP2 family profile. 125 185 IPR001289 GO:0003700|GO:0006355
Eupl06g01437 221 Gene3D - 125 187 - -
Eupl06g01437 221 SMART cbf3 124 185 IPR001289 GO:0003700|GO:0006355
Eupl06g01437 221 MobiDBLite consensus disorder prediction 168 221 - -
Eupl06g01437 221 PRINTS CCAAT-binding transcription factor subunit B signature 159 182 IPR001289 GO:0003700|GO:0006355
Eupl06g01437 221 PRINTS CCAAT-binding transcription factor subunit B signature 128 150 IPR001289 GO:0003700|GO:0006355
Eupl06g01437 221 MobiDBLite consensus disorder prediction 143 162 - -
Eupl06g01437 221 MobiDBLite consensus disorder prediction 36 57 - -
Eupl06g01437 221 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 127 182 IPR001289 GO:0003700|GO:0006355
Eupl06g01437 221 ProSitePatterns NF-YA/HAP2 subunit signature. 130 150 IPR018362 GO:0003677|GO:0016602
Eupl06g01437 221 MobiDBLite consensus disorder prediction 141 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01437 Eupl-Chr6 25574889 25612825 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01437 1 200 CCAAT-HAP2 Transcription Factor Family AT1G30500 51.980 3.12e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Eupl06g01437 CBFB_NFYA 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01437 K08064 - psom:113312585 251.521